RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SLC25A12O75746 678 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 LRATO95237 230 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 SP1P08047 785 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 CT62P0C5K7 136 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 KITP10721 976 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 TACR1P25103 407 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 NRG3P56975 720 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 FUT7Q11130 342 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 SMU1Q2TAY7 513 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 PRICKLE4Q2TBC4 344 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 HSP90B2PQ58FF3 399 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 PIGGQ5H8A4 983 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 IL23RQ5VWK5 629 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 FAM111BQ6SJ93 734 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 IL20RBQ6UXL0 311 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 C9orf40Q8IXQ3 194 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 LIX1Q8N485 282 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 SLC15A4Q8N697 577 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 BCORP1Q8N888 145 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 CLHC1Q8NHS4 586 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 ZFP28Q8NHY6 868 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■■■■ 33
USF1-205ENST00000473969 ZNF75CPQ92670 426 aaPredicted RBP12.75□□□□□ -0.37
USF1-205ENST00000473969 MTERF3Q96E29 417 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 EGLN2Q96KS0 407 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 C3orf30Q96M34 536 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 ZNF681Q96N22 645 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 SIGLEC12Q96PQ1 595 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 SMG1Q96Q15 3661 aaKnown RBP12.75□□□□□ -0.37
USF1-205ENST00000473969 RASL10BQ96S79 203 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 C1orf50Q9BV19 199 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 NUF2Q9BZD4 464 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 WWTR1Q9GZV5 400 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 INTS9Q9NV88 658 aaKnown RBP12.75□□□□□ -0.37
USF1-205ENST00000473969 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 TAS2R7Q9NYW3 318 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 MAT2BQ9NZL9 334 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 GIMAP2Q9UG22 337 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 HAO1Q9UJM8 370 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 KLF13Q9Y2Y9 288 aaPredicted RBP12.75□□□□□ -0.37
USF1-205ENST00000473969 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 CAPN14A8MX76 684 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 KLRC4-KLRK1H3BQV0 150 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 KLF11O14901 512 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 PDPK1O15530 556 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 NEURL1O76050 574 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 SLITRK5O94991 958 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 CRYABP02511 175 aaKnown RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 JUNP05412 331 aaKnown RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 SOX3P41225 446 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 NR0B1P51843 470 aaKnown RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 EMX2Q04743 252 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 ELOAQ14241 798 aaKnown RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 EBPQ15125 230 aaKnown RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 LTB4RQ15722 352 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 C16orf47Q6ZP98 133 aaPredicted RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 DND1Q8IYX4 353 aaKnown RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 MDS2Q8NDY4 140 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 OR52R1Q8NGF1 315 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 OR9A2Q8NGT5 310 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 ZNF675Q8TD23 568 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 GRHL3Q8TE85 626 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 TP53INP1Q96A56 240 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 ERP27Q96DN0 273 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 ZBED6CLQ96FA7 236 aaPredicted RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 TRIM45Q9H8W5 580 aaPredicted RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 ATAD3AQ9NVI7 634 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 ASF1BQ9NVP2 202 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 NOP53Q9NZM5 478 aaKnown RBP12.74□□□□□ -0.37
USF1-205ENST00000473969 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
USF1-205ENST00000473969 TMEM200CA6NKL6 621 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 MYO1GB0I1T2 1018 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 HDAC3O15379 428 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 COQ9O75208 318 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 SNNO75324 88 aaPredicted RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 SASH3O75995 380 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 PCSK2P16519 638 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 LBPP18428 481 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 GPC1P35052 558 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 MANFP55145 182 aaKnown RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 DCAF7P61962 342 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 MRPS35P82673 323 aaKnown RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 FOXK1P85037 733 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 EXOSC7Q15024 291 aaKnown RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 CEBPEQ15744 281 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 IGFBP7Q16270 282 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 TRMT12Q53H54 448 aaKnown RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 PRR30Q53SZ7 412 aaPredicted RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 ZNF628Q5EBL2 1059 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 ZNF468Q5VIY5 522 aaPredicted RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 RTL4Q6ZR62 310 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 GALNTL5Q7Z4T8 443 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 NATD1Q8N6N6 113 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 ZNF615Q8N8J6 731 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 DNAJB8Q8NHS0 232 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 C16orf52Q8NHV5 167 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 KAT2AQ92830 837 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 MIB2Q96AX9 1013 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 SCMH1Q96GD3 660 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 ZNF764Q96H86 408 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms