RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 MARC2Q969Z3 335 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 UPRTQ96BW1 309 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 ZBED6CLQ96FA7 236 aaPredicted RBP9.59□□□□□ -0.87
APTX-216ENST00000472896 KCNJ15Q99712 375 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 CCM2Q9BSQ5 444 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 TMEM43Q9BTV4 400 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 TRIM62Q9BVG3 475 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 MND1Q9BWT6 205 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 ULBP1Q9BZM6 244 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 CD244Q9BZW8 370 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 LDAHQ9H6V9 325 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 PPP1R3EQ9H7J1 279 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 AMBNQ9NP70 447 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 NLKQ9UBE8 527 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 PLEKHB1Q9UF11 243 aaPredicted RBP9.59□□□□□ -0.87
APTX-216ENST00000472896 LSM2Q9Y333 95 aaKnown RBP9.59□□□□□ -0.87
APTX-216ENST00000472896 MAB21L2Q9Y586 359 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 CDH10Q9Y6N8 788 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 FLNBO75369 2602 aaKnown RBP9.59□□□□□ -0.87
APTX-216ENST00000472896 ANAPC1Q9H1A4 1944 aa9.59□□□□□ -0.87
APTX-216ENST00000472896 URB1O60287 2271 aaKnown RBP9.59□□□□□ -0.88
APTX-216ENST00000472896 WDFY3Q8IZQ1 3526 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 LOC400499M0QZD8 3231 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CIB4A0PJX0 185 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 A8MUA0 341 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 SMLR1H3BR10 107 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 TNFRSF11BO00300 401 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 CHP2O43745 196 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 GJB3O75712 270 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CDRT1O95170 752 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PRAMEF1O95521 474 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 DHFRP00374 187 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CKMP06732 381 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PRPS2P11908 318 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 ANXA3P12429 323 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 STOMP27105 288 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 NUP62P37198 522 aaPredicted RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 KIR2DL1P43626 348 aaPredicted RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 MAN2A2P49641 1150 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CLDN8P56748 225 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 EXOSC2Q13868 293 aaKnown RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 SPHARQ15513 63 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CD276Q5ZPR3 534 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 RTL4Q6ZR62 310 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CLEC20AQ6ZU45 233 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 RRM2BQ7LG56 351 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 TRIM46Q7Z4K8 759 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 ADGRG2Q8IZP9 1017 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PLA2G15Q8NCC3 412 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 SRFBP1Q8NEF9 429 aaKnown RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 OR10G2Q8NGC3 310 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 OR4L1Q8NH43 312 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CLHC1Q8NHS4 586 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 TMEM163Q8TC26 289 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PMM1Q92871 262 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 TADA1Q96BN2 335 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 MTERF3Q96E29 417 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 TRMT2BQ96GJ1 504 aaKnown RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 ZNF419Q96HQ0 510 aaPredicted RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 TBATAQ96M53 351 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 SERPINB11Q96P15 392 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PKMYT1Q99640 499 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 DPYSL5Q9BPU6 564 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PRR14Q9BWN1 585 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 GSX2Q9BZM3 304 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 LRTM1Q9HBL6 345 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 GALNT9Q9HCQ5 603 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 ZFP64Q9NPA5 681 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 SERHLQ9NQF3 203 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 MPP6Q9NZW5 540 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 TMCC3Q9ULS5 477 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 NEU3Q9UQ49 428 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 HRH3Q9Y5N1 445 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 SNX10Q9Y5X0 201 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CLCA3PQ9Y6N3 262 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 CEP192Q8TEP8 1941 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PCM1Q15154 2024 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 HELZP42694 1942 aaKnown RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 BPTFQ12830 3046 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 APC2O95996 2303 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 LOC285095A0A1B0GVY8 99 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 C7orf66A4D0T2 115 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 OR51F1A6NGY5 319 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PCP4L1A6NKN8 68 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 YJEFN3A6XGL0 299 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 H3BM21 787 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 KPNA5O15131 536 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 HCRTO43612 131 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 DIRAS1O95057 198 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 NFATC1O95644 943 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 PRB1P04280 392 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 FHP07954 510 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 FTH1P19P0C7X4 201 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 HLA-DPA1P20036 260 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 TAF6P49848 677 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 HNRNPA0Q13151 305 aaKnown RBP9.58□□□□□ -0.88
APTX-216ENST00000472896 GTF2H2Q13888 395 aa9.58□□□□□ -0.88
APTX-216ENST00000472896 C1DQ13901 141 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms