RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 PYGBP11216 843 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 PORP16435 677 aaPredicted RBP14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 ATP5F1P24539 256 aaPredicted RBP14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 HMOX2P30519 316 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 FEN1P39748 380 aaKnown RBP14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 ALDH9A1P49189 494 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 MAN2A2P49641 1150 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 SLC10A1Q14973 349 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 RASA2Q15283 850 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 NTRK2Q16620 822 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 HYAL4Q2M3T9 481 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 GXYLT1Q4G148 440 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 SLC48A1Q6P1K1 146 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 ZNF585AQ6P3V2 769 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 GPRIN3Q6ZVF9 776 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 ZNF441Q8N8Z8 693 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 ACBD4Q8NC06 268 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 TM4SF18Q96CE8 201 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 C14orf79Q96F83 325 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 ZNF382Q96SR6 550 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 TXLNGYQ9BZA5 131 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 BRINP2Q9C0B6 783 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 OR10A5Q9H207 317 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 EPB41L4BQ9H329 900 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 PROK2Q9HC23 129 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 NMRK1Q9NWW6 199 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 CNIH4Q9P003 139 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 CNOT11Q9UKZ1 510 aaKnown RBP14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 CHCHD2Q9Y6H1 151 aaPredicted RBP14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 HIVEP1P15822 2718 aa14.46□□□□□ -0.09
CCDC88B-205ENST00000472524 AKAP9Q99996 3911 aa14.46□□□□□ -0.1
CCDC88B-205ENST00000472524 CCDC168Q8NDH2 2452 aa14.46□□□□□ -0.1
CCDC88B-205ENST00000472524 GOLGA6L10A6NI86 522 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 FAM90A27PA6NNH2 459 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 AQP7O14520 342 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 BCKDKO14874 412 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 ESRRBO95718 433 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 KRT6AP02538 564 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 KRT6BP04259 564 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 RFPL3SP0C7P2 107 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 CHN1P15882 459 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 IMPDH1P20839 514 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 KRT6CP48668 564 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 HTR6P50406 440 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 NUP107P57740 925 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 FBXW4P57775 412 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 TLE4Q04727 773 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 PMPCAQ10713 525 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 FUT7Q11130 342 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 TESK1Q15569 626 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 FAM180BQ6P0A1 224 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 FAM111BQ6SJ93 734 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 MEX3BQ6ZN04 569 aaKnown RBP14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 LCA5Q86VQ0 697 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 SLC22A9Q8IVM8 553 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 PRR22Q8IZ63 422 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 ZNF615Q8N8J6 731 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 ACMSDQ8TDX5 336 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 RND1Q92730 232 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 DIO2Q92813 273 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 KLHL29Q96CT2 875 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 DOHHQ9BU89 302 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 ENKD1Q9H0I2 346 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 ZNF703Q9H7S9 590 aaPredicted RBP14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 ZFP64Q9NPA5 681 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 VPS29Q9UBQ0 182 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 BCAP29Q9UHQ4 241 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 CES1P1Q9UKY3 287 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 RNF6Q9Y252 685 aa14.45□□□□□ -0.1
CCDC88B-205ENST00000472524 TRGV5A0A0B4J1U4 118 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 A0A1B0GVC2 190 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 OR14I1A6ND48 311 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 LRRC3CA6NJW4 275 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 FIGNL2A6NMB9 653 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 CAPN14A8MX76 684 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 FOXO6A8MYZ6 492 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 TP53I11O14683 189 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 GSTA1P08263 222 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 HSD3B1P14060 373 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 HSD3B2P26439 372 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 PRKAA2P54646 552 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 NRG3P56975 720 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 CSTF3Q12996 717 aaKnown RBP14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 EXOSC7Q15024 291 aaKnown RBP14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 RPS6KA2Q15349 733 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 NNATQ16517 81 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 PRICKLE4Q2TBC4 344 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 BICRALQ6AI39 1079 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 CDH24Q86UP0 819 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 CCDC71Q8IV32 467 aaPredicted RBP14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 VWA5B2Q8N398 1253 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 ADCY4Q8NFM4 1077 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 OR7G1Q8NGA0 311 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 METTL6Q8TCB7 284 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 MZB1Q8WU39 189 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 CHTF18Q8WVB6 975 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 ASB5Q8WWX0 329 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 ADIPOR1Q96A54 375 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 TP53INP1Q96A56 240 aa14.44□□□□□ -0.1
CCDC88B-205ENST00000472524 ZNF597Q96LX8 424 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms