RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 RASSF6Q6ZTQ3 369 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 KCT2Q8NC54 265 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 ZNF680Q8NEM1 530 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 OR4E2Q8NGC2 313 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 OR6M1Q8NGM8 313 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 PTP4A1Q93096 173 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 PPCDCQ96CD2 204 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 TRMT61AQ96FX7 289 aaKnown RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 ZNF583Q96ND8 569 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 TPT1P8Q9HAU6 139 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 CD93Q9NPY3 652 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 SLC25A37Q9NYZ2 338 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 ABCG2Q9UNQ0 655 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 MGAT4BQ9UQ53 548 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 PCDHA9Q9Y5H5 950 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 PCYT1BQ9Y5K3 369 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 TP53BP1Q12888 1972 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 GPR179Q6PRD1 2367 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 C1QTNF3-AMACRE9PGA6 284 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 RASGRP1O95267 797 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 MASP1P48740 699 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 CDH12P55289 794 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 FLI1Q01543 452 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 CD47Q08722 323 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 C1orf61Q13536 156 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 SPRED1Q7Z699 444 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 C17orf64Q86WR6 236 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 CPXM2Q8N436 756 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 CHDHQ8NE62 594 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 FRMD6Q96NE9 622 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 BARD1Q99728 777 aaKnown RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 MAGEL2Q9UJ55 1249 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 TTC28Q96AY4 2481 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 GSAPA4D1B5 854 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 METTL15A6NJ78 407 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 ACADMP11310 421 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 CD22P20273 847 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 MAPK1P28482 360 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 IMPA1P29218 277 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 SSR2P43308 183 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 PFN3P60673 137 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 CCINQ13939 588 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 USP51Q70EK9 711 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 TMEFF1Q8IYR6 380 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 HMGB4Q8WW32 186 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 YIPF5Q969M3 257 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 TSACCQ96A04 125 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 KCNC2Q96PR1 638 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 ZNF300Q96RE9 604 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 SLC12A9Q9BXP2 914 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 ZCCHC2Q9C0B9 1178 aaKnown RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 ZNF639Q9UID6 485 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 H7C0S8 307 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 SLC22A2O15244 555 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 PFKLP17858 780 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 RFC2P35250 354 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 SMSP52788 366 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 KCNAB2Q13303 367 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 IL18R1Q13478 541 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 CAMK1Q14012 370 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 ZNF169Q14929 603 aaPredicted RBP11.71□□□□□ -0.53
USP11-206ENST00000469080 DUSP6Q16828 381 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 PARM1Q6UWI2 310 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 ENPP7Q6UWV6 458 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 DEF8Q6ZN54 512 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 FAM83HQ6ZRV2 1179 aaPredicted RBP11.71□□□□□ -0.53
USP11-206ENST00000469080 SMARCD2Q92925 531 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 PPP1R16AQ96I34 528 aa11.71□□□□□ -0.53
USP11-206ENST00000469080 MBNL1Q9NR56 388 aaKnown RBP11.71□□□□□ -0.53
USP11-206ENST00000469080 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.53
USP11-206ENST00000469080 RTTNQ86VV8 2226 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 SLC30A4O14863 429 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 IL6P05231 212 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 SPIBQ01892 262 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 RPA4Q13156 261 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 QPRTQ15274 297 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 ZNF77Q15935 545 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 NKG7Q16617 165 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 DLEU7Q6UYE1 221 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 ERN2Q76MJ5 926 aaKnown RBP11.71□□□□□ -0.54
USP11-206ENST00000469080 RNF130Q86XS8 419 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 NAGSQ8N159 534 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 NFKBIDQ8NI38 313 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 ATOH1Q92858 354 aaPredicted RBP11.71□□□□□ -0.54
USP11-206ENST00000469080 CFHR5Q9BXR6 569 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 ZNF768Q9H5H4 540 aaKnown RBP11.71□□□□□ -0.54
USP11-206ENST00000469080 MKLN1Q9UL63 735 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 TBC1D24Q9ULP9 559 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 WDFY4Q6ZS81 3184 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 PATJQ8NI35 1801 aa11.71□□□□□ -0.54
USP11-206ENST00000469080 H0YAE9 185 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 SLC1A7O00341 560 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 GMFGO60234 142 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 IL3P08700 152 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 FCGR1AP12314 374 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 APEHP13798 732 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms