RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 WDR26Q9H7D7 661 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PPP1R3EQ9H7J1 279 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 REEP1Q9H902 201 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RNF122Q9H9V4 155 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SPON1Q9HCB6 807 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NIT2Q9NQR4 276 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HEBP1Q9NRV9 189 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZFP57Q9NU63 452 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 TMLHEQ9NVH6 421 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NDUFB11Q9NX14 153 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HECAQ9UBI9 543 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF112Q9UJU3 913 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ING1Q9UK53 422 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SCML1Q9UN30 329 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 AAR2Q9Y312 384 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RPL36Q9Y3U8 105 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PCDHGA9Q9Y5G4 932 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PCDHGA6Q9Y5G7 932 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PCDHGA2Q9Y5H1 932 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NRAPQ86VF7 1730 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 NUP98P52948 1817 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ARID2Q68CP9 1835 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 A0A0B4J293 547 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TCRBV16S1A1N1A0A5B0 115 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 UBA6A0AVT1 1052 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 GSAPA4D1B5 854 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MTMR11A4FU01 709 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 RRN3P2A6NIE6 340 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM189-UBE2V1I3L0A0 370 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DFFAO00273 331 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ETV2O00321 342 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MAN2B1O00754 1011 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ADAM10O14672 748 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 WNT9AO14904 365 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 CASKO14936 926 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 HNRNPDLO14979 420 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SCAMP1O15126 338 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 NUPL2O15504 423 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SLC7A4O43246 635 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SSX4O60224 188 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PRAMEF2O60811 474 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 RDH16O75452 317 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 WBP4O75554 376 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 REM1O75628 298 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 CREG1O75629 220 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 RPS6KA4O75676 772 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 EIF3GO75821 320 aaKnown RBP eCLIP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ANXA9O76027 345 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 VNN2O95498 520 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MT-CYBP00156 380 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 C1RP00736 705 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PLATP00750 562 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FABP3P05413 133 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 HLA-DOAP06340 250 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FCER2P06734 321 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 NMBP08949 121 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ALDOCP09972 364 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SELLP14151 372 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 POU2F1P14859 743 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 HNRNPLP14866 589 aaKnown RBP eCLIP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF8P17098 575 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 LAG3P18627 525 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 HTR2AP28223 471 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 RBMS1P29558 406 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 AGTR1P30556 359 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FGF9P31371 208 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 S100A11P31949 105 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ATP5C1P36542 298 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ETV5P41161 510 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 CSKP41240 450 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 CCR10P46092 362 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 EVX1P49640 407 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SUCLG1P53597 346 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DCDP81605 110 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 IRF9Q00978 393 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MC2RQ01718 297 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ACY1Q03154 408 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TAP2Q03519 686 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DSC1Q08554 894 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ST3GAL4Q11206 333 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FOXO1Q12778 655 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 LCP2Q13094 533 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DUSP4Q13115 394 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ILKQ13418 452 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DYRK1AQ13627 763 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SNTB1Q13884 538 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 GK2Q14410 553 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PPA1Q15181 289 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FCN2Q15485 313 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 HMGN3Q15651 99 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 GPR68Q15743 365 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MPEG1Q2M385 716 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM44Q2T9K0 475 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TIGD5Q53EQ6 642 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PLA1AQ53H76 456 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 HECTD3Q5T447 861 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TSTD2Q5T7W7 516 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FAM171A1Q5VUB5 890 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TDRD10Q5VZ19 366 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 KIAA0930Q6ICG6 404 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms