RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 MGAT5Q09328 741 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 ZNF267Q14586 743 aaPredicted RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 MORF4L2Q15014 288 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 ZKSCAN8Q15776 578 aaPredicted RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 WIPI1Q5MNZ9 446 aaPredicted RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 HP1BP3Q5SSJ5 553 aaPredicted RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 FBXW10Q5XX13 1052 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 FRA10AC1Q70Z53 315 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 PACS2Q86VP3 889 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 GPSM1Q86YR5 675 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 TAGAPQ8N103 731 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 RIT1Q92963 219 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 WNT2BQ93097 391 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 HGDQ93099 445 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 UCN3Q969E3 161 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 Q96MF0 132 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 CD244Q9BZW8 370 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 PHACTR1Q9C0D0 580 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 OR2B2Q9GZK3 357 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 OR51B5Q9H339 312 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 PIGMQ9H3S5 423 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 DDX31Q9H8H2 851 aaKnown RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 SMYD2Q9NRG4 433 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 SNX15Q9NRS6 342 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 CHMP2BQ9UQN3 213 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 JRKLQ9Y4A0 524 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 FREM3P0C091 2139 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 RAI1Q7Z5J4 1906 aaPredicted RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 ROS1P08922 2347 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 C2orf92A0A1B0GVN3 265 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 E7ESA3 106 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 SAP18O00422 153 aaKnown RBP11.08□□□□□ -0.64
UBR4-211ENST00000467272 HCRTR2O43614 444 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 DYRK3O43781 588 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 ERN1O75460 977 aaKnown RBP11.08□□□□□ -0.64
UBR4-211ENST00000467272 EEDO75530 441 aaKnown RBP11.08□□□□□ -0.64
UBR4-211ENST00000467272 SOX30O94993 753 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 CT62P0C5K7 136 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 RHOXF2BP0C7M4 288 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 NAGAP17050 411 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 SSTR4P31391 388 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 CCKARP32238 428 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 POU4F1Q01851 419 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 IRF8Q02556 426 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 ACKR1Q16570 336 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 HIST2H2ACQ16777 129 aaPredicted RBP11.08□□□□□ -0.64
UBR4-211ENST00000467272 HIST2H2AA3Q6FI13 130 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 MED27Q6P2C8 311 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 C22orf34Q6ZV56 151 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 LRRC70Q7Z2Q7 622 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 YTHDF3Q7Z739 585 aaKnown RBP11.08□□□□□ -0.64
UBR4-211ENST00000467272 PDIK1LQ8N165 341 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 VWA5B2Q8N398 1253 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 RNF175Q8N4F7 328 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 SNX31Q8N9S9 440 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 WDSUB1Q8N9V3 476 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 HUS1BQ8NHY5 278 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 UBE2E3Q969T4 207 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 CFAP36Q96G28 342 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 WFIKKN1Q96NZ8 548 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 NAP1L3Q99457 506 aaPredicted RBP11.08□□□□□ -0.64
UBR4-211ENST00000467272 TM9SF2Q99805 663 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 GSX2Q9BZM3 304 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 PSD3Q9NYI0 1048 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 TRPS1Q9UHF7 1281 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 PHF11Q9UIL8 331 aa11.08□□□□□ -0.64
UBR4-211ENST00000467272 MTO1Q9Y2Z2 717 aaKnown RBP11.08□□□□□ -0.64
UBR4-211ENST00000467272 CAPN14A8MX76 684 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 B4DXG7 233 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 SNPHO15079 494 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 AIFM1O95831 613 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 CCDC166P0CW27 439 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 CYP4B1P13584 511 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 CRYGSP22914 178 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 ABCD3P28288 659 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 LHX2P50458 406 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 CLDN18P56856 261 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 ATP6V0D1P61421 351 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 EEF1A1P68104 462 aaKnown RBP11.07□□□□□ -0.64
UBR4-211ENST00000467272 MGAT2Q10469 447 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 ILF2Q12905 390 aaKnown RBP11.07□□□□□ -0.64
UBR4-211ENST00000467272 SNTA1Q13424 505 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 FASTKD3Q14CZ7 662 aaKnown RBP11.07□□□□□ -0.64
UBR4-211ENST00000467272 EEF1A1P5Q5VTE0 462 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 GRHL2Q6ISB3 625 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 PLXDC2Q6UX71 529 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 LUZP2Q86TE4 346 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 YRDCQ86U90 279 aaKnown RBP11.07□□□□□ -0.64
UBR4-211ENST00000467272 P3H2Q8IVL5 708 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 RGMAQ96B86 450 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 INTS12Q96CB8 462 aaKnown RBP11.07□□□□□ -0.64
UBR4-211ENST00000467272 STARD4Q96DR4 205 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 REPIN1Q9BWE0 567 aaKnown RBP11.07□□□□□ -0.64
UBR4-211ENST00000467272 CAB39LQ9H9S4 337 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 C6orf203Q9P0P8 240 aaPredicted RBP11.07□□□□□ -0.64
UBR4-211ENST00000467272 ADGRE2Q9UHX3 823 aa11.07□□□□□ -0.64
UBR4-211ENST00000467272 PACSIN3Q9UKS6 424 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms