RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 C17orf105B2RV13 164 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 MRASO14807 208 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 ANGPT2O15123 496 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 EFSO43281 561 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 PLOD3O60568 738 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 CBX7O95931 251 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 C1QCP02747 245 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 ZCCHC18P0CG32 403 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 NT5EP21589 574 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 OTX2P32243 289 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 MC3RP41968 323 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 FUT7Q11130 342 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 GTDC1Q4AE62 458 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 CRTC2Q53ET0 693 aaPredicted RBP10.39□□□□□ -0.75
VCP-204ENST00000466100 PAPD4Q6PIY7 484 aaKnown RBP10.39□□□□□ -0.75
VCP-204ENST00000466100 TMEM107Q6UX40 140 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 GPR155Q7Z3F1 870 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 OR2L13Q8N349 312 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 VWA5B2Q8N398 1253 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 SIMC1Q8NDZ2 872 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 VPS37AQ8NEZ2 397 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 OR4A15Q8NGL6 344 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 OR14A16Q8NHC5 309 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 SFXN5Q8TD22 340 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 DOK4Q8TEW6 326 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 ZNF721Q8TF20 911 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 KAT2AQ92830 837 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 RIT1Q92963 219 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 ELP4Q96EB1 424 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 FAM120BQ96EK7 910 aaKnown RBP10.39□□□□□ -0.75
VCP-204ENST00000466100 RBM18Q96H35 190 aaKnown RBP10.39□□□□□ -0.75
VCP-204ENST00000466100 FBXL20Q96IG2 436 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 IMMP1LQ96LU5 166 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 NPAS2Q99743 824 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 EFHD1Q9BUP0 239 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 SEMA4CQ9C0C4 833 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 EPS8L2Q9H6S3 715 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 RMND5AQ9H871 391 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 SLC25A37Q9NYZ2 338 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 BSNQ9UPA5 3926 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 A8MUA0 341 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 UPK1AO00322 258 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 RFXANKO14593 260 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 ERN1O75460 977 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 SEC24DO94855 1032 aaPredicted RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 CPSF4O95639 269 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 IFNA16P05015 189 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 ABCB1P08183 1280 aaPredicted RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 EIF2S3P41091 472 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 SLC26A5P58743 744 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 STX5Q13190 355 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 ATP1A4Q13733 1029 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 TRMT5Q32P41 509 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 TRMT12Q53H54 448 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 EXOSC6Q5RKV6 272 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 C6orf10Q5SRN2 563 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 C8orf82Q6P1X6 216 aaPredicted RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 HACD2Q6Y1H2 254 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 DNAJC14Q6Y2X3 702 aaPredicted RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 DHDDSQ86SQ9 333 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 RAB43Q86YS6 212 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 ZNF321PQ8N8H1 164 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 ZNF615Q8N8J6 731 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 APCDD1LQ8NCL9 501 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 MORN4Q8NDC4 146 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 FBXO27Q8NI29 283 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 SLC2A12Q8TD20 617 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 DAZLQ92904 295 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 GIMAP5Q96F15 307 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 SENP5Q96HI0 755 aaPredicted RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 NAF1Q96HR8 494 aaKnown RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 NSL1Q96IY1 281 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 PANX1Q96RD7 426 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 LPAR4Q99677 370 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 ANKRA2Q9H9E1 313 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 P4HTMQ9NXG6 502 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 VAPAQ9P0L0 249 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 PTGFRNQ9P2B2 879 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 ZNF223Q9UK11 482 aaPredicted RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 FBXL4Q9UKA2 621 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 C19orf53Q9UNZ5 99 aaPredicted RBP10.38□□□□□ -0.75
VCP-204ENST00000466100 ERVK-19Q9WJR5 959 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 PCDHB14Q9Y5E9 798 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 GMEB1Q9Y692 573 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 CLCA3PQ9Y6N3 262 aa10.38□□□□□ -0.75
VCP-204ENST00000466100 RNF103-CHMP3A0A140T963 221 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 C1QTNF9BB2RNN3 333 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 KLK10O43240 276 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 EMC8O43402 210 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 KCNH1O95259 989 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 HPP00738 406 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 NPPAP01160 153 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 GSNP06396 782 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 C1QTNF9P0C862 333 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 CALB2P22676 271 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 UQCRC2P22695 453 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 SSTR4P31391 388 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 GPC1P35052 558 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 CPOXP36551 454 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms