RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CWC27Q6UX04 472 aaKnown RBP3.33□□□□□ -1.88
LRCH3-211ENST00000466054 MOB2Q70IA6 237 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 ARL14Q8N4G2 192 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 LEMD2Q8NC56 503 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 EXOC6Q8TAG9 804 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 ITLN1Q8WWA0 313 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 P3H4Q92791 437 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 JPH2Q9BR39 696 aaPredicted RBP3.33□□□□□ -1.88
LRCH3-211ENST00000466054 DDX47Q9H0S4 455 aaKnown RBP3.33□□□□□ -1.88
LRCH3-211ENST00000466054 PNNQ9H307 717 aaKnown RBP3.33□□□□□ -1.88
LRCH3-211ENST00000466054 THAP9Q9H5L6 903 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 HOMER3Q9NSC5 361 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 ABCC13Q9NSE7 274 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 CLEC5AQ9NY25 188 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 SENP1Q9P0U3 644 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 SLC6A5Q9Y345 797 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 KIF7Q2M1P5 1343 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 PTPRUQ92729 1446 aa3.33□□□□□ -1.88
LRCH3-211ENST00000466054 SYCE3A1L190 88 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 CCDC69A6NI79 296 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 E9PAM4 449 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 MCF2LO15068 1137 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 ZBTB14O43829 449 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 SNRPCP09234 159 aaKnown RBP3.32□□□□□ -1.88
LRCH3-211ENST00000466054 FAM200BP0CF97 657 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 HNRNPFP52597 415 aaKnown RBP3.32□□□□□ -1.88
LRCH3-211ENST00000466054 RPS4XP62701 263 aaKnown RBP3.32□□□□□ -1.88
LRCH3-211ENST00000466054 PPP2R5CQ13362 524 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 C17orf58Q2M2W7 97 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 ZNF774Q6NX45 483 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 CEACAM19Q7Z692 300 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 RABEPKQ7Z6M1 372 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 BATF2Q8N1L9 274 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 CHCHD4Q8N4Q1 142 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 SUMF1Q8NBK3 374 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 TMEM185AQ8NFB2 350 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 URGCPQ8TCY9 931 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 U2AF1L4Q8WU68 220 aaKnown RBP3.32□□□□□ -1.88
LRCH3-211ENST00000466054 ST6GALNAC5Q9BVH7 336 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 HPS4Q9NQG7 708 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 KCNN3Q9UGI6 736 aa3.32□□□□□ -1.88
LRCH3-211ENST00000466054 HCFC1P51610 2035 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 SYNJ2O15056 1496 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 NPC1L1Q9UHC9 1359 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 A0A087WWV3 80 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 NPIPA5A0A0B4J1W7 369 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 ZNF840PA6NDX5 716 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 NPIPA5E9PKD4 350 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 LRP3O75074 770 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 SRSF10O75494 262 aaKnown RBP3.31□□□□□ -1.88
LRCH3-211ENST00000466054 KBTBD11O94819 623 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 SYNGR4O95473 234 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 CXCL10P02778 98 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 MATKP42679 507 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 BRCC3P46736 316 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 NUMBP49757 651 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 CCL11P51671 97 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 SRP54P61011 504 aaKnown RBP3.31□□□□□ -1.88
LRCH3-211ENST00000466054 HKDC1Q2TB90 917 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 EIPR1Q53HC9 387 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 SLC25A30Q5SVS4 291 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 TAF3Q5VWG9 929 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 RNLSQ5VYX0 342 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 PLBD1Q6P4A8 553 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 OLFM4Q6UX06 510 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 Q6ZR54 194 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 HIPK1Q86Z02 1210 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 ZNF491Q8N8L2 437 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 RELL2Q8NC24 303 aaPredicted RBP3.31□□□□□ -1.88
LRCH3-211ENST00000466054 MGARPQ8TDB4 240 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 AGAP11Q8TF27 550 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 TMEM37Q8WXS4 190 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 ACCSQ96QU6 501 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 CPXM1Q96SM3 734 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 RUFY1Q96T51 708 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 TTYH2Q9BSA4 534 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 FTHL17Q9BXU8 183 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 ZBP1Q9H171 429 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 COPS7AQ9UBW8 275 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 MLXQ9UH92 298 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 FAM153AQ9UHL3 310 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 MOSPD1Q9UJG1 213 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 EMCNQ9ULC0 261 aa3.31□□□□□ -1.88
LRCH3-211ENST00000466054 STRAPQ9Y3F4 350 aaKnown RBP3.31□□□□□ -1.88
LRCH3-211ENST00000466054 ZNF487B1APH4 448 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 CYB561D2O14569 222 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 PHF1O43189 567 aaPredicted RBP3.3□□□□□ -1.88
LRCH3-211ENST00000466054 BUB1O43683 1085 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 ZNF354AO60765 605 aaPredicted RBP3.3□□□□□ -1.88
LRCH3-211ENST00000466054 NUDT14O95848 222 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 MT-ND3P03897 115 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 PGK2P07205 417 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 GSTA1P08263 222 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 GP9P14770 177 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 STMN1P16949 149 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 UCP1P25874 307 aa3.3□□□□□ -1.88
LRCH3-211ENST00000466054 MAT2AP31153 395 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms