RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DUSP7Q16829 419 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 MANEAQ5SRI9 462 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 ARMC6Q6NXE6 501 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 OR4N4Q8N0Y3 316 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 GJD3Q8N144 294 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 BPIFB6Q8NFQ5 453 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 CADM4Q8NFZ8 388 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 OR4C15Q8NGM1 316 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 C10orf90Q96M02 699 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 PIP5K1AQ99755 562 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 C3orf14Q9HBI5 128 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 PRDM9Q9NQV7 894 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 KCMF1Q9P0J7 381 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 FBXL21Q9UKT6 434 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 SH3GLB1Q9Y371 365 aa20.48■□□□□ 0.87
PDLIM2-216ENST00000464275 IFNW1P05000 195 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 PRR5P85299 388 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 GPR19Q15760 415 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 CYP27C1Q4G0S4 372 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 IQCHQ86VS3 1027 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 SAMD14Q8IZD0 417 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 DEFB119Q8N690 84 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 XAGE5Q8WWM1 108 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 KLHL6Q8WZ60 621 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 FKBP10Q96AY3 582 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 MS4A12Q9NXJ0 267 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 TRIOBPQ9H2D6 2365 aa20.47■□□□□ 0.87
PDLIM2-216ENST00000464275 B4DGG1 531 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 CSF2P04141 144 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ALPPL2P10696 532 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ZNF182P17025 639 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 RHCEP18577 417 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 PCMT1P22061 227 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 PRKAG1P54619 331 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 LIM2P55344 173 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 MVKQ03426 396 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 BNIP3Q12983 259 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 RUNX2Q13950 521 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ELOCQ15369 112 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 SYPL1Q16563 259 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 DEFB134Q4QY38 66 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 LAIR2Q6ISS4 152 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 TMEM107Q6UX40 140 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 TTC29Q8NA56 475 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 AVL9Q8NBF6 648 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 OR5D16Q8NGK9 328 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 PLEKHA8Q96JA3 519 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 SCN3BQ9NY72 215 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 WARS2Q9UGM6 360 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 DAPP1Q9UN19 280 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 COLQQ9Y215 455 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 PRAMEF27A3QJZ7 478 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ZNF99A8MXY4 864 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 SERPINB7O75635 380 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ANGPTL1O95841 491 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 RECKO95980 971 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 NR2F1P10589 423 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ALOX12P18054 663 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 TLX1P31314 330 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 CLK3P49761 638 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 CDH12P55289 794 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 SNRPNP63162 240 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 GNA13Q14344 377 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ZNF605Q86T29 641 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ZNF761Q86XN6 746 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 APOBEC4Q8WW27 367 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 PROX1Q92786 737 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 TANKQ92844 425 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 ELP4Q96EB1 424 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 FUNDC2Q9BWH2 189 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 LYRM4Q9HD34 91 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 POMT2Q9UKY4 750 aa20.46■□□□□ 0.87
PDLIM2-216ENST00000464275 A0A1W2PS29 197 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 A8MVJ9 347 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 HMGN2P05204 90 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 ANXA8P13928 327 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 NME1P15531 152 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 KCNJ5P48544 419 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 PXNP49023 591 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 HMGA2P52926 109 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 IL5RAQ01344 420 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 RAPSNQ13702 412 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 SIM2Q14190 667 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 PUS10Q3MIT2 529 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 ZNF554Q86TJ5 538 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 GKN2Q86XP6 184 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 KRT73Q86Y46 540 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 SVOPQ8N4V2 548 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 NUP43Q8NFH3 380 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 GPR32P1Q8NGA4 272 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 OR10G2Q8NGC3 310 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 BBS10Q8TAM1 723 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 TREX2Q9BQ50 279 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 DUSP21Q9H596 190 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 BCL2L10Q9HD36 194 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 GPC6Q9Y625 555 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 hCG_2014768A0A024R1R8 64 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 EIF2S1P05198 315 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 PTGER1P34995 402 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 CRISP3P54108 245 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms