RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.42□□□□□ -1.862e-9■■■■■ 43.2
SCFD1-204ENST00000463622 SPSB4Q96A44 273 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 C19orf60Q96EN9 201 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 DCUN1D1Q96GG9 259 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 APOPT1Q96IL0 206 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PPM1MQ96MI6 270 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SELENOSQ9BQE4 189 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM79Q9BSE2 394 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CCM2Q9BSQ5 444 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 OSGEPL1Q9H4B0 414 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 XKR8Q9H6D3 395 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ALG9Q9H6U8 611 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 APMAPQ9HDC9 416 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 NSMCE4AQ9NXX6 385 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TUBA8Q9NY65 449 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 UTP6Q9NYH9 597 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TAAR2Q9P1P5 351 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TXNDC16Q9P2K2 825 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TRMT6Q9UJA5 497 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 USP22Q9UPT9 525 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CCDC168Q8NDH2 2452 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 NCF1BA6NI72 391 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 A8MT66 165 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 NCF1CA8MVU1 366 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 B4DGG1 531 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 E5RI56 91 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 POLR1CO15160 346 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 KMOO15229 486 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SPRY2O43597 315 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ITM2AO43736 263 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 VPS26AO75436 327 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 LYPLA1O75608 230 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 KLHL2O95198 593 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 FTH1P02794 183 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ANKRD34CP0C6C1 535 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 OR56A5P0C7T3 313 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 NCF1P14598 390 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CHN1P15882 459 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 EPORP19235 508 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CD9P21926 228 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PSMB5P28074 263 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PEBP1P30086 187 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ALDH3A1P30838 453 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 DLSTP36957 453 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ACTR1BP42025 376 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 NR4A2P43354 598 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 FASLGP48023 281 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PTDSS1P48651 473 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 DIO1P49895 249 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ACTR1AP61163 376 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SUMO2P61956 95 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 DMPKQ09013 629 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PRKG2Q13237 762 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ZRSR2Q15696 482 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 RPE65Q16518 533 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ZNF260Q3ZCT1 412 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 LYPLAL1Q5VWZ2 237 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 UGT3A1Q6NUS8 523 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 OTOAQ7RTW8 1153 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 AMZ2Q86W34 360 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SLC22A15Q8IZD6 547 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 C11orf44Q8N8P7 122 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 LINC01555Q8NAE3 123 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 HM13Q8TCT9 377 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SLC37A2Q8TED4 501 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 INPP5DQ92835 1189 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PNPLA2Q96AD5 504 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PYCR2Q96C36 320 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CTHRC1Q96CG8 243 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SNRNP40Q96DI7 357 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 LURAP1Q96LR2 239 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM237Q96Q45 408 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PKP4Q99569 1192 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CCDC77Q9BR77 488 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TIMM29Q9BSF4 260 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 HGH1Q9BTY7 390 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SLC25A23Q9BV35 468 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 GSDMCQ9BYG8 508 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PITPNM3Q9BZ71 974 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 DERL2Q9GZP9 239 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SPNS1Q9H2V7 528 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ZBTB26Q9HCK0 441 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TAS2R13Q9NYV9 303 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ZNF225Q9UK10 706 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 KCND3Q9UK17 655 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PADI1Q9ULC6 663 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PDE10AQ9Y233 779 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ACOT9Q9Y305 439 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PLLPQ9Y342 182 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SHANK1Q9Y566 2161 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CSMD2Q7Z408 3487 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 A0A1W2PPV9 198 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ARHGAP10A1A4S6 786 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ANKUB1A6NFN9 424 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PDZK1P1A8MUH7 402 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 HMGB1P1B2RPK0 211 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 C21orf140B9A014 251 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 GFYI3L273 518 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 RAB27BO00194 218 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms