RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZCCHC23Q6ZST2 131 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 GALNTL5Q7Z4T8 443 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 DDIASQ8IXT1 998 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 FAM9CQ8IZT9 166 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 RAB3IL1Q8TBN0 382 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 FRMD6Q96NE9 622 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 OR10A5Q9H207 317 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 MIEF1Q9NQG6 463 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 KLHL1Q9NR64 748 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 PRODH2Q9UF12 536 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 C2orf92A0A1B0GVN3 265 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 HRKO00198 91 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 OR6B1O95007 311 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 NADKO95544 446 aaPredicted RBP12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 FBXO45P0C2W1 286 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 S1PR1P21453 382 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 RPL3P39023 403 aaKnown RBP12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 FEN1P39748 380 aaKnown RBP12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 ABCE1P61221 599 aaKnown RBP12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 CHI3L2Q15782 390 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 ZNF791Q3KP31 576 aaPredicted RBP12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 HHATQ5VTY9 493 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 RGS9BPQ6ZS82 235 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 LRRC34Q8IZ02 419 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 MMP21Q8N119 569 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 FAM26EQ8N5C1 309 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 MTERF3Q96E29 417 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 SPACA9Q96E40 222 aaPredicted RBP12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 RAP2CQ9Y3L5 183 aa12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 POLR3HQ9Y535 204 aaPredicted RBP12.09□□□□□ -0.47
R3HDM1-213ENST00000463230 MYO1GB0I1T2 1018 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 PIP5K1BO14986 540 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 CT62P0C5K7 136 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 LINC00032P0C843 101 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 NAGAP17050 411 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 NTSP30990 170 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 TMED10P49755 219 aaKnown RBP12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 ALDH6A1Q02252 535 aaKnown RBP12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 ZNF628Q5EBL2 1059 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 FHL5Q5TD97 284 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 ZFP62Q8NB50 900 aaPredicted RBP12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 PSD4Q8NDX1 1056 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 OR2T11Q8NH01 316 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 BRINP2Q9C0B6 783 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 FIS1Q9Y3D6 152 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 MYO18BQ8IUG5 2567 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 ESPL1Q14674 2120 aa12.08□□□□□ -0.48
R3HDM1-213ENST00000463230 NBASA2RRP1 2371 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 A0A1W2PS29 197 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 ACOX3O15254 700 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 PEX1O43933 1283 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 PLOD3O60568 738 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 PCSK2P16519 638 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SSTR4P31391 388 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 ARRB2P32121 409 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 UQCRFS1P47985 274 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 NRG3P56975 720 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 RPP38P78345 283 aaKnown RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 RBPJQ06330 500 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 MAD2L1Q13257 205 aaPredicted RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 MPP2Q14168 576 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 LYPD8Q6UX82 237 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 IL20RBQ6UXL0 311 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 ADIPOR1Q96A54 375 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 EXOSC8Q96B26 276 aaKnown RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 HSPBAP1Q96EW2 488 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 BBS4Q96RK4 519 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 GAL3ST4Q96RP7 486 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SECISBP2Q96T21 854 aaKnown RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 HES7Q9BYE0 225 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SACM1LQ9NTJ5 587 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 CNIH4Q9P003 139 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 ZDHHC2Q9UIJ5 367 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 MAPRE3Q9UPY8 281 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 CROCCQ5TZA2 2017 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 A0A087WV62 115 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 TMEM120BA0PK00 339 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 TMEM233B4DJY2 109 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 PRPS2P11908 318 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SDC1P18827 310 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 CNR1P21554 472 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 GPX3P22352 226 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SLC1A6P48664 564 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 RPL38P63173 70 aaKnown RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 STX3Q13277 289 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 ZNF750Q32MQ0 723 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 ATP6AP1LQ52LC2 224 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 TBCELQ5QJ74 424 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 GK5Q6ZS86 529 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 R3HCC1LQ7Z5L2 792 aaKnown RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 TICAM1Q8IUC6 712 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SIAH3Q8IW03 269 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SULF2Q8IWU5 870 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 NATD1Q8N6N6 113 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 GPR137Q96N19 417 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 FAM173AQ9BQD7 235 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 VIPAS39Q9H9C1 493 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms