RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ANKHD1Q8IWZ3 2542 aaKnown RBP18.15■□□□□ 0.5
VARS-221ENST00000463184 PLPP1O14494 284 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 CRYZQ08257 329 aaKnown RBP18.14■□□□□ 0.49
VARS-221ENST00000463184 DDX39BQ13838 428 aaKnown RBP18.14■□□□□ 0.49
VARS-221ENST00000463184 MROH9Q5TGP6 573 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 TAOK1Q7L7X3 1001 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 DOK4Q8TEW6 326 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 DCAKDQ8WVC6 231 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 DIO2Q92813 273 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 CAVIN3Q969G5 261 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 TP53INP1Q96A56 240 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 NMRAL1Q9HBL8 299 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 DMRT3Q9NQL9 472 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 DLL4Q9NR61 685 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 LYARQ9NX58 379 aaKnown RBP18.14■□□□□ 0.49
VARS-221ENST00000463184 FETUBQ9UGM5 382 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 PCDHGA11Q9Y5H2 935 aa18.14■□□□□ 0.49
VARS-221ENST00000463184 C2orf92A0A1B0GVN3 265 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 TUBAL3A6NHL2 446 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 SUPT3HB4E1H0 165 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 KERAO60938 352 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 SUPT3HO75486 399 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 PRKRAO75569 313 aaKnown RBP18.13■□□□□ 0.49
VARS-221ENST00000463184 TRAPPC6AO75865 159 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 SNX4O95219 450 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 LRATO95237 230 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 HPNP05981 417 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 PTX3P26022 381 aaPredicted RBP18.13■□□□□ 0.49
VARS-221ENST00000463184 CNTFP26441 200 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 CRABP2P29373 138 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 PHEXP78562 749 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 LIPJQ5W064 366 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 NSUN5P2Q63ZY6 315 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 MRM1Q6IN84 353 aaKnown RBP18.13■□□□□ 0.49
VARS-221ENST00000463184 POMZP3Q6PJE2 187 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 RAPH1Q70E73 1250 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 KIF18BQ86Y91 864 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 RNF175Q8N4F7 328 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 HSPBAP1Q96EW2 488 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 ATOH8Q96SQ7 321 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 SECISBP2Q96T21 854 aaKnown RBP18.13■□□□□ 0.49
VARS-221ENST00000463184 MTERF1Q99551 399 aaKnown RBP18.13■□□□□ 0.49
VARS-221ENST00000463184 PRDM14Q9GZV8 571 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 SNX15Q9NRS6 342 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 ASB4Q9Y574 426 aa18.13■□□□□ 0.49
VARS-221ENST00000463184 HMX2A2RU54 273 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 UBXN8O00124 270 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 CLPSP04118 112 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 LTA4HP09960 611 aaKnown RBP18.12■□□□□ 0.49
VARS-221ENST00000463184 FREM3P0C091 2139 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 SLC35E2BP0CK96 405 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 SLC35E2P0CK97 266 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 EPXP11678 715 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 TACR1P25103 407 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 HSD17B3P37058 310 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 ZNF136P52737 540 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 ADAM8P78325 824 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 RPS6KA2Q15349 733 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 LGSNQ5TDP6 509 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 PAMR1Q6UXH9 720 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 TBC1D1Q86TI0 1168 aaPredicted RBP18.12■□□□□ 0.49
VARS-221ENST00000463184 PACS2Q86VP3 889 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 CNPY4Q8N129 248 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 ZNF441Q8N8Z8 693 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 SPPL2AQ8TCT8 520 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 REPS1Q96D71 796 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 ZNF717Q9BY31 904 aaPredicted RBP18.12■□□□□ 0.49
VARS-221ENST00000463184 UBQLN3Q9H347 655 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 DDX31Q9H8H2 851 aaKnown RBP18.12■□□□□ 0.49
VARS-221ENST00000463184 WDR41Q9HAD4 459 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 RPH3AQ9Y2J0 694 aaPredicted RBP18.12■□□□□ 0.49
VARS-221ENST00000463184 ANGPTL3Q9Y5C1 460 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 NPFFR2Q9Y5X5 522 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 ACANP16112 2415 aa18.12■□□□□ 0.49
VARS-221ENST00000463184 A0A0A6YYD5 115 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 A0A1W2PR48 441 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 WASHC1A8K0Z3 465 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 KDM4EB2RXH2 506 aaPredicted RBP18.11■□□□□ 0.49
VARS-221ENST00000463184 H0YIV9 168 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 RAF1P04049 648 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 NR2F6P10588 404 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 GCAP28676 217 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 BSGP35613 385 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 GMPRP36959 345 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 TMED10P49755 219 aaKnown RBP18.11■□□□□ 0.49
VARS-221ENST00000463184 CDK9P50750 372 aaKnown RBP18.11■□□□□ 0.49
VARS-221ENST00000463184 FBXW4P57775 412 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 RPS13P62277 151 aaKnown RBP18.11■□□□□ 0.49
VARS-221ENST00000463184 RPP38P78345 283 aaKnown RBP18.11■□□□□ 0.49
VARS-221ENST00000463184 DLG1Q12959 904 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 CUL3Q13618 768 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 NHSL2Q5HYW2 709 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 FBXW10Q5XX13 1052 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 HLA-DQA1Q5Y7H0 255 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 VASNQ6EMK4 673 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 CYP20A1Q6UW02 462 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 CCDC91Q7Z6B0 441 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 CMC1Q7Z7K0 106 aa18.11■□□□□ 0.49
VARS-221ENST00000463184 MYLK4Q86YV6 388 aaPredicted RBP18.11■□□□□ 0.49
VARS-221ENST00000463184 TEX9Q8N6V9 391 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms