RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ANP32BQ92688 251 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 HIST1H2ACQ93077 130 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 MED30Q96HR3 178 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CNOT6LQ96LI5 555 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 DEFB118Q96PH6 123 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CCDC77Q9BR77 488 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CCM2Q9BSQ5 444 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CAPS2Q9BXY5 557 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 VIPAS39Q9H9C1 493 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 DDX18Q9NVP1 670 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 RDH8Q9NYR8 311 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 AIPL1Q9NZN9 384 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ERVK-18Q9QC07 812 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 FOXJ3Q9UPW0 622 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 INO80Q9ULG1 1556 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 ATP10AO60312 1499 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 PLB1Q6P1J6 1458 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 EVPLQ92817 2033 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 IFT172Q9UG01 1749 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ABCA6Q8N139 1617 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 USP32Q8NFA0 1604 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ZMYM6O95789 1325 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 REREQ9P2R6 1566 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 BOLA2-SMG1P6H3BVE0 249 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 P2RX6O15547 441 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ERLIN1O75477 346 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 KRT33AO76009 404 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 KIAA0754O94854 1291 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 OR4F21O95013 312 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 EML2O95834 649 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 NGFP01138 241 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 SLC2A2P11168 524 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 RPL35AP18077 110 aaKnown RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 DLSTP36957 453 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ALDH3B1P43353 468 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 CCR4P51679 360 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 MEF2DQ14814 521 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 C3AR1Q16581 482 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ZNF74Q16587 644 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 CCDC57Q2TAC2 916 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ZNF528Q3MIS6 628 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 CAPN13Q6MZZ7 669 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 SASS6Q6UVJ0 657 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 LEKR1Q6ZMV7 388 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 FOXL2NBQ6ZUU3 175 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 NFE4Q86UQ8 179 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 NAGSQ8N159 534 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 COLGALT1Q8NBJ5 622 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 DMBX1Q8NFW5 382 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 OR2T11Q8NH01 316 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 NUDCD2Q8WVJ2 157 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 FCAMRQ8WWV6 532 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 CASP10Q92851 521 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 FBXO32Q969P5 355 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 PCED1BQ96HM7 432 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 C10orf90Q96M02 699 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 IL12RB2Q99665 862 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ALG12Q9BV10 488 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 CCDC94Q9BW85 323 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 C1QTNF4Q9BXJ3 329 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 DDX31Q9H8H2 851 aaKnown RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 CALHM2Q9HA72 323 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 S100A14Q9HCY8 104 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 SIX2Q9NPC8 291 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.6□□□□□ -1.99
HPS3-203ENST00000460822 LHX3Q9UBR4 397 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 EPHA6Q9UF33 1036 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 NAP1L2Q9ULW6 460 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 CLEC4AQ9UMR7 237 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 PLCL2Q9UPR0 1127 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 SCAF11Q99590 1463 aaKnown RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 POLR3AO14802 1390 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 KANK1Q14678 1352 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 UMODL1Q5DID0 1318 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 GLTPD2A6NH11 291 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 FAM47DPA6NHR8 397 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 A8MUI8 341 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 H0YC42 278 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 SLC1A7O00341 560 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 DCXO43602 365 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 SEC24AO95486 1093 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 IL1BP01584 269 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 APRTP07741 180 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 LYNP07948 512 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 GLRA1P23415 457 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 HTR2AP28223 471 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 CA8P35219 290 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 DCTP40126 519 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 PTGFRP43088 359 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 OR3A2P47893 321 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 BACE1P56817 501 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 MFGE8Q08431 387 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 SRSF9Q13242 221 aaKnown RBP eCLIP2.6□□□□□ -1.99
HPS3-203ENST00000460822 CLPPQ16740 277 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 ATP1A1-AS1Q5TC04 95 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ZNF324BQ6AW86 544 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 FIP1L1Q6UN15 594 aaKnown RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 PRSS57Q6UWY2 283 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 C18orf65Q6ZTR6 163 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 LUZP1Q86V48 1076 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms