RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.74□□□□□ -2.13
SYPL1-203ENST00000460770 HMG20BQ9P0W2 317 aa1.74□□□□□ -2.13
SYPL1-203ENST00000460770 CGNQ9P2M7 1197 aaKnown RBP1.74□□□□□ -2.13
SYPL1-203ENST00000460770 ZNF346Q9UL40 294 aaKnown RBP1.74□□□□□ -2.13
SYPL1-203ENST00000460770 RABL2BQ9UNT1 228 aa1.74□□□□□ -2.13
SYPL1-203ENST00000460770 KCNK6Q9Y257 313 aa1.74□□□□□ -2.13
SYPL1-203ENST00000460770 NCKAP1Q9Y2A7 1128 aa1.74□□□□□ -2.13
SYPL1-203ENST00000460770 EXOC6BQ9Y2D4 811 aa1.74□□□□□ -2.13
SYPL1-203ENST00000460770 CLCA3PQ9Y6N3 262 aa1.74□□□□□ -2.13
SYPL1-203ENST00000460770 TDRD6O60522 2096 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TRBV5-4A0A0C4DH59 114 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 C2orf92A0A1B0GVN3 265 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TRIM64CA6NLI5 447 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TRIM49D1C9J1S8 452 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 LMO7DNF2Z398 122 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 NPIPA3F8WFD2 350 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 K7EPI3 171 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 E2F3O00716 465 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 FLRT2O43155 660 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 PRAF2O60831 178 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ATP9AO75110 1047 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ATP6V1G1O75348 118 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 FRAT2O75474 233 aaPredicted RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 AKR7A3O95154 331 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 LETM1O95202 739 aaPredicted RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TRIM16O95361 564 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 FGF19O95750 216 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ANGPTL1O95841 491 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TGFAP01135 160 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ALOX5P09917 674 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ANKRD34CP0C6C1 535 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CPA3P15088 417 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ARF4P18085 180 aaPredicted RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 UGT1A6P19224 532 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 GDF1P27539 372 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 RPA1P27694 616 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 MDH2P40926 338 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 PRPHP41219 470 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 SLC1A3P43003 542 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 SLC25A1P53007 311 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 SLC26A5P58743 744 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 BTG1P62324 171 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CNTN1Q12860 1018 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ABRAXAS2Q15018 415 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TAF7Q15545 349 aaPredicted RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ACKR1Q16570 336 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 C12orf60Q5U649 245 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 IGFL2Q6UWQ7 119 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ABRAXAS1Q6UWZ7 409 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 RBM43Q6ZSC3 357 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 PRSS42Q7Z5A4 293 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CROCCP3Q8IVE0 287 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 NAXDQ8IW45 347 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 UBQLNLQ8IYU4 475 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ZNF781Q8N8C0 355 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CLEC1AQ8NC01 280 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CNNM3Q8NE01 707 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 IPMKQ8NFU5 416 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 OR52E1Q8NGJ3 308 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 EXOC6Q8TAG9 804 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 SETD7Q8WTS6 366 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CKAP2Q8WWK9 683 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 FAM46BQ96A09 425 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 SNRNP40Q96DI7 357 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TRIM44Q96DX7 344 aaPredicted RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 DTD2Q96FN9 168 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CFAP36Q96G28 342 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 NSMCE2Q96MF7 247 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 NAP1L3Q99457 506 aaPredicted RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TEX13AQ9BXU3 409 aaPredicted RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 DDX47Q9H0S4 455 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 HSD3B7Q9H2F3 369 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TSPY26PQ9H489 355 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 NGBQ9NPG2 151 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 POLE3Q9NRF9 147 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 AATFQ9NY61 560 aaKnown RBP eCLIP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 MAD2L2Q9UI95 211 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 TRMT6Q9UJA5 497 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 CCPG1Q9ULG6 757 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 GPR132Q9UNW8 380 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 EXOC7Q9UPT5 735 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 RUVBL2Q9Y230 463 aaKnown RBP1.73□□□□□ -2.13
SYPL1-203ENST00000460770 ATP6V0A2Q9Y487 856 aa1.73□□□□□ -2.13
SYPL1-203ENST00000460770 A0A0B4J203 849 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 TRBV2A0A0J9YWF9 115 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 ILVBLA1L0T0 632 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 FAM149AA5PLN7 773 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 PINLYPA6NC86 204 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 CFAP73A6NFT4 308 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 EPOPA6NHQ4 379 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 PRSS46E5RG02 174 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 E5RGE8 158 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 H0YIG0 161 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 H3BMM5 538 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 TLR4O00206 839 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 RASGRF2O14827 1237 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 PEX11AO75192 247 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 GMNNO75496 209 aa1.72□□□□□ -2.13
SYPL1-203ENST00000460770 PTBP3O95758 552 aaKnown RBP1.72□□□□□ -2.13
SYPL1-203ENST00000460770 GAS8O95995 478 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms