RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CCDC188H7C350 402 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 EIF3HO15372 352 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDLBP-227ENST00000458564 EEDO75530 441 aaKnown RBP9.52□□□□□ -0.89
HDLBP-227ENST00000458564 TRAPPC6AO75865 159 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 ACSL3O95573 720 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 ACTL6AO96019 429 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 FAM58BPP0C7Q3 252 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 MTHFD2P13995 350 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 PTX3P26022 381 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-227ENST00000458564 PTPN6P29350 595 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 SSTR1P30872 391 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 SSTR4P31391 388 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 CASP3P42574 277 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 MASP1P48740 699 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 NRG3P56975 720 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 RPS13P62277 151 aaKnown RBP9.52□□□□□ -0.89
HDLBP-227ENST00000458564 PHEXP78562 749 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 DDX39BQ13838 428 aaKnown RBP9.52□□□□□ -0.89
HDLBP-227ENST00000458564 RCAN2Q14206 197 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 PCBP2Q15366 365 aaKnown RBP eCLIP9.52□□□□□ -0.891e-10■■■■□ 20.2
HDLBP-227ENST00000458564 EIPR1Q53HC9 387 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 SHEQ5VZ18 495 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 TIGD3Q6B0B8 471 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 OR52E8Q6IFG1 317 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 TMEM64Q6YI46 380 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 CAPN12Q6ZSI9 719 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 CXorf67Q86X51 503 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-227ENST00000458564 CREG2Q8IUH2 290 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 GALNT12Q8IXK2 581 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 ZNF615Q8N8J6 731 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 C9orf106Q8NAJ2 232 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 LINC01560Q8TB33 94 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 DOK4Q8TEW6 326 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 PYROXD1Q8WU10 500 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 ABTB1Q969K4 478 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-227ENST00000458564 ISL2Q96A47 359 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 REPS1Q96D71 796 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 ARSGQ96EG1 525 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 UCN2Q96RP3 112 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 TRIB1Q96RU8 372 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 YIPF4Q9BSR8 244 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 SFXN3Q9BWM7 321 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 EPB41L4BQ9H329 900 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 WDR41Q9HAD4 459 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 NMRAL1Q9HBL8 299 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 CAMK2AQ9UQM7 478 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 SLC6A5Q9Y345 797 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 FREM3P0C091 2139 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 DOCK7Q96N67 2140 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 KIAA1549Q9HCM3 1950 aa9.52□□□□□ -0.89
HDLBP-227ENST00000458564 TLN2Q9Y4G6 2542 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 A0A1B0GTL3 188 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 A0A1W2PPR1 153 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 GLOD5A6NK44 160 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 WASHC1A8K0Z3 465 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 SYCE1LA8MT33 242 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 FAM171A2A8MVW0 826 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 SUPT3HB4E1H0 165 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 UBXN8O00124 270 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 FOXE1O00358 373 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 ERN1O75460 977 aaKnown RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 SUPT3HO75486 399 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 SEMA3DO95025 777 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 HEXAP06865 529 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 GSTA2P09210 222 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 LTA4HP09960 611 aaKnown RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 RHOXF2BP0C7M4 288 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 TMIGD3P0DMS9 266 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 CPN1P15169 458 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 NAGAP17050 411 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 ABCD3P28288 659 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 ADSLP30566 484 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 SPRP35270 261 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 PCYT1AP49585 367 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 NAGLUP54802 743 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 DLG1Q12959 904 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 WIPI1Q5MNZ9 446 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 HLA-DQA1Q5Y7H0 255 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 CYP20A1Q6UW02 462 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 CCDC91Q7Z6B0 441 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 NUDT13Q86X67 352 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 FAM83FQ8NEG4 500 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-227ENST00000458564 OR7G1Q8NGA0 311 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 RHEBL1Q8TAI7 183 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 WDR20Q8TBZ3 569 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 SMR3AQ99954 134 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 TRIM31Q9BZY9 425 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 OR10A5Q9H207 317 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 ACTR8Q9H981 624 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 GALNT8Q9NY28 637 aa9.51□□□□□ -0.89
HDLBP-227ENST00000458564 EXPH5Q8NEV8 1989 aa9.5□□□□□ -0.89
HDLBP-227ENST00000458564 A0A1W2PS29 197 aa9.5□□□□□ -0.89
HDLBP-227ENST00000458564 SH3D21A4FU49 640 aa9.5□□□□□ -0.89
HDLBP-227ENST00000458564 SNPHO15079 494 aa9.5□□□□□ -0.89
HDLBP-227ENST00000458564 ZSCAN12O43309 604 aa9.5□□□□□ -0.89
HDLBP-227ENST00000458564 PPM1BO75688 479 aa9.5□□□□□ -0.89
HDLBP-227ENST00000458564 RCBTB2O95199 551 aa9.5□□□□□ -0.89
HDLBP-227ENST00000458564 ABCB1P08183 1280 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-227ENST00000458564 CT62P0C5K7 136 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms