RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF486Q96H40 463 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 ZDHHC18Q9NUE0 388 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GPR160Q9UJ42 338 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PCDHA2Q9Y5H9 948 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 A6NIZ1 184 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CD3GP09693 182 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SNCAP37840 140 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF132P52740 706 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RAP1BP61224 184 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PCBD1P61457 104 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RAP1AP62834 184 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GALEQ14376 348 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 UPP1Q16831 310 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NRROSQ86YC3 692 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RNF113BQ8IZP6 322 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 EFCAB3Q8N7B9 438 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GALNT11Q8NCW6 608 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CDKN2AIPNLQ96HQ2 116 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GPR20Q99678 358 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM246Q9BRR3 403 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CIPCQ9C0C6 399 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 DNTTIP1Q9H147 329 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RNF121Q9H920 327 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FBXO8Q9NRD0 319 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RLIMQ9NVW2 624 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 Q9Y3F1 56 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 APOC3P02656 99 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 C1GALT1C1LP0DN25 315 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF43P17038 809 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CCND3P30281 292 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 USP49Q70CQ1 688 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CILP2Q8IUL8 1156 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ASB12Q8WXK4 309 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF559Q9BR84 538 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SLC25A32Q9H2D1 315 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 UBIAD1Q9Y5Z9 338 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 STRCQ7RTU9 1775 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TEX13DA0A0J9YY54 714 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 ARVCFO00192 962 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ABHD16AO95870 558 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SYPP08247 313 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 LAG3P18627 525 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RPS3P23396 243 aaKnown RBP eCLIP5□□□□□ -1.61
CSMD3-204ENST00000455883 KLK7P49862 253 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 BDH1Q02338 343 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 MALLQ13021 153 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 P2RY14Q15391 338 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SMAD1Q15797 465 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 CYBRD1Q53TN4 286 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RNASE10Q5GAN6 216 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 HBMQ6B0K9 141 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GPR149Q86SP6 731 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SLC51BQ86UW2 128 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ALYREFQ86V81 257 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 FNDC9Q8TBE3 224 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NSMAFQ92636 917 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 C5orf34Q96MH7 638 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CNTNAP3BQ96NU0 1288 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FXYD6Q9H0Q3 95 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 EPHA6Q9UF33 1036 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PCDHB9Q9Y5E1 797 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SIPA1L2Q9P2F8 1722 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 BRCA1P38398 1863 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 ISM1B1AKI9 464 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 C9J4A7 227 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NPIPA5E9PKD4 350 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 MEIS2O14770 477 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 USP12O75317 370 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 EVI2BP34910 448 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GSK3BP49841 420 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CREB5Q02930 508 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NOMO2Q5JPE7 1267 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PLAG1Q6DJT9 500 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SLC18B1Q6NT16 456 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NRSN1Q8IZ57 195 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PIAS4Q8N2W9 510 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 OR52E4Q8NGH9 312 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 OR6K6Q8NGW6 343 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 LGMNQ99538 433 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FAM83CQ9BQN1 747 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ACTR10Q9NZ32 417 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NPIPA1Q9UND3 350 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 DHDHQ9UQ10 334 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FANCGO15287 622 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SHBGP04278 402 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 G6PDP11413 515 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 BCKDHAP12694 445 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FOSL2P15408 326 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CD9P21926 228 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PCGF2P35227 344 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GBE1Q04446 702 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TLE2Q04725 743 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PCDH1Q08174 1060 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GPR162Q16538 588 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 H3F3CQ6NXT2 135 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PDZD3Q86UT5 571 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PIGZQ86VD9 579 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GPR65Q8IYL9 337 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms