RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 COX10Q12887 443 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 GPR19Q15760 415 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 PGBD2Q6P3X8 592 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 ZNF367Q7RTV3 350 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 SZRD1Q7Z422 152 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 AMIGO1Q86WK6 493 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 NLGN4XQ8N0W4 816 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 IL17RCQ8NAC3 791 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 Q96MT0 163 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 MACROD1Q9BQ69 325 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 DCSTAMPQ9H295 470 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 SLC25A19Q9HC21 320 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 DNAAF2Q9NVR5 837 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 LYARQ9NX58 379 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 KLF15Q9UIH9 416 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 ENTPD4Q9Y227 616 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 A3GALT2U3KPV4 340 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 TLR4O00206 839 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 CASC3O15234 703 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 PRKRAO75569 313 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 UGT2B17O75795 530 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 PTHP01270 115 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 HMGN2P05204 90 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 RPLP0P05388 317 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 CHRM5P08912 532 aaPredicted RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 OCM2P0CE71 109 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 OCMP0CE72 109 aaPredicted RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 F3P13726 295 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 MPIP34949 423 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 LIMK1P53667 647 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 PRR5P85299 388 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 ALDH6A1Q02252 535 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 LEXMQ3ZCV2 418 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 C12orf73Q69YU5 71 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 PLAG1Q6DJT9 500 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 USP30Q70CQ3 517 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 LACC1Q8IV20 430 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 CCDC116Q8IYX3 515 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 MFSD4AQ8N468 514 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 SLC7A13Q8TCU3 470 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 WFDC6Q9BQY6 131 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 SLC6A17Q9H1V8 727 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 NKX2-4Q9H2Z4 354 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 APOBEC3BQ9UH17 382 aaKnown RBP14.21□□□□□ -0.13
LDLR-202ENST00000455727 PCOLCE2Q9UKZ9 415 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 KLK4Q9Y5K2 254 aa14.21□□□□□ -0.13
LDLR-202ENST00000455727 EMC8O43402 210 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 HOXB2P14652 356 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 GADD45AP24522 165 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 POU1F1P28069 291 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 RGS6P49758 472 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 NDUFA9Q16795 377 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 USP43Q70EL4 1123 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 PAQR7Q86WK9 346 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 LCN9Q8WX39 176 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 POLR2J3Q9H1A7 115 aaKnown RBP14.2□□□□□ -0.14
LDLR-202ENST00000455727 MMP27Q9H306 513 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 KCNK12Q9HB15 430 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 GIMAP4Q9NUV9 329 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 TBC1D29Q9UFV1 150 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 FBXW2Q9UKT8 454 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 REV3LO60673 3130 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 ISM1B1AKI9 464 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 M0R129 80 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 ZW10O43264 779 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 ASNA1O43681 348 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 STATHP02808 62 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 ASGR2P07307 311 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 CHRM4P08173 479 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 COL9A1P20849 921 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 CERS1P27544 350 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 XKP51811 444 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 PRKAG1P54619 331 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 RPS15AP62244 130 aaKnown RBP14.2□□□□□ -0.14
LDLR-202ENST00000455727 PPP2CBP62714 309 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 PPP2CAP67775 309 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 FUT5Q11128 374 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 PIN1Q13526 163 aaPredicted RBP14.2□□□□□ -0.14
LDLR-202ENST00000455727 ARMCX4Q5H9R4 360 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 MEDAGQ5VYS4 303 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 C18orf63Q68DL7 685 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 C19orf48Q6RUI8 117 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 ZNF554Q86TJ5 538 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 SLC22A18Q96BI1 424 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 ZNF681Q96N22 645 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 FNDC11Q9BVV2 318 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 PINK1Q9BXM7 581 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 TWSG1Q9GZX9 223 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 S1PR5Q9H228 398 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 C3orf14Q9HBI5 128 aa14.2□□□□□ -0.14
LDLR-202ENST00000455727 POM121BA6NF01 834 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 KPNA4O00629 521 aaPredicted RBP14.19□□□□□ -0.14
LDLR-202ENST00000455727 EPPINO95925 133 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 DUSP2Q05923 314 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 FOXD4Q12950 439 aaPredicted RBP14.19□□□□□ -0.14
LDLR-202ENST00000455727 TARDBPQ13148 414 aaKnown RBP eCLIP14.19□□□□□ -0.14
LDLR-202ENST00000455727 LASP1Q14847 261 aaKnown RBP14.19□□□□□ -0.14
LDLR-202ENST00000455727 NFATC4Q14934 902 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 TJAP1Q5JTD0 557 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 MTSS1LQ765P7 747 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms