RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 VASNQ6EMK4 673 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 OR52E8Q6IFG1 317 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 CYP20A1Q6UW02 462 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SEM1Q6ZVN7 128 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 RAPH1Q70E73 1250 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 TBC1D1Q86TI0 1168 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 OR4N5Q8IXE1 308 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 KLHL7Q8IXQ5 586 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 MMP21Q8N119 569 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 C17orf47Q8NEP4 570 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 TNIP2Q8NFZ5 429 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 HUS1BQ8NHY5 278 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 MBD3L2Q8NHZ7 208 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SPPL2AQ8TCT8 520 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ISL2Q96A47 359 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 PPWD1Q96BP3 646 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 TMEM41AQ96HV5 264 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 C18orf12Q96KH6 178 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 UBXN10Q96LJ8 280 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 RILPQ96NA2 401 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 DACH2Q96NX9 599 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 RBBP8Q99708 897 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 TIMP4Q99727 224 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 TM9SF2Q99805 663 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 WDR83Q9BRX9 315 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SFXN3Q9BWM7 321 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ANGPTL4Q9BY76 406 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 LIME1Q9H400 295 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 PSD3Q9NYI0 1048 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 FETUBQ9UGM5 382 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 CAMK2AQ9UQM7 478 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 CFL2Q9Y281 166 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 C15orf41Q9Y2V0 281 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 MTO1Q9Y2Z2 717 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 NPFFR2Q9Y5X5 522 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 CLCA1A8K7I4 914 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 H0YIV9 168 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 SAP18O00422 153 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PLPP1O14494 284 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 CASKO14936 926 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PHGDHO43175 533 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 GUCY1B2O75343 617 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 RHOXF2BP0C7M4 288 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 FAM58BPP0C7Q3 252 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 TMIGD3P0DMS9 266 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 CYP4B1P13584 511 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 NAGAP17050 411 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 EPORP19235 508 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PIK3R1P27986 724 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PAFAH1B1P43034 410 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF136P52737 540 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 DIO3P55073 304 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 DCAF7P61962 342 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 CALCOCO2Q13137 446 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 SNTA1Q13424 505 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 GAB1Q13480 694 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 SNTB1Q13884 538 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 FASTKD3Q14CZ7 662 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PCBP2Q15366 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 GRTP1Q5TC63 336 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 C18orf63Q68DL7 685 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 METTL2BQ6P1Q9 378 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ENPP6Q6UWR7 440 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 NUDT13Q86X67 352 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 MYLK4Q86YV6 388 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 GALNT12Q8IXK2 581 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 SPATA6LQ8N4H0 392 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF441Q8N8Z8 693 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 NAXEQ8NCW5 288 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 OR7G1Q8NGA0 311 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ZPLD1Q8TCW7 415 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 SMPDL3BQ92485 455 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 EXT2Q93063 718 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 UCN3Q969E3 161 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ABTB1Q969K4 478 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ESAMQ96AP7 390 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 TRIB1Q96RU8 372 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 OR51B5Q9H339 312 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 UBQLN3Q9H347 655 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PIGMQ9H3S5 423 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ALG9Q9H6U8 611 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 DDX31Q9H8H2 851 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ACTR8Q9H981 624 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 CAB39LQ9H9S4 337 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 CXorf21Q9HAI6 301 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PROK2Q9HC23 129 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 JKAMPQ9P055 326 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 RNF14Q9UBS8 474 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 NDRG3Q9UGV2 375 aa7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 TNPO3Q9Y5L0 923 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-209ENST00000454952 ARID1AO14497 2285 aa7.34□□□□□ -1.24
NIF3L1-209ENST00000454952 A0A0A6YYD5 115 aa7.33□□□□□ -1.24
NIF3L1-209ENST00000454952 FAM159BA6NKW6 160 aa7.33□□□□□ -1.24
NIF3L1-209ENST00000454952 HRKO00198 91 aa7.33□□□□□ -1.24
NIF3L1-209ENST00000454952 FOXE1O00358 373 aaPredicted RBP7.33□□□□□ -1.24
NIF3L1-209ENST00000454952 ACOX3O15254 700 aa7.33□□□□□ -1.24
NIF3L1-209ENST00000454952 SH3BGRLO75368 114 aa7.33□□□□□ -1.24
NIF3L1-209ENST00000454952 SEMA3DO95025 777 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms