RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 KCNE3Q9Y6H6 103 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 B4DGG1 531 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PDLIM1O00151 329 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 FFAR1O14842 300 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 GIPC1O14908 333 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 RGS14O43566 566 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 BCAS1O75363 584 aaPredicted RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 ERN1O75460 977 aaKnown RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 NKX2-2O95096 273 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ALBP02768 609 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 RPLP0P05388 317 aaKnown RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 NGFRP08138 427 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ZNF23P17027 643 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 SAT1P21673 171 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PSMA4P25789 261 aaKnown RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 CMPK1P30085 196 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 TRPC1P48995 793 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 IRF3Q14653 427 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PUM1Q14671 1186 aaKnown RBP eCLIP4.62□□□□□ -1.67
RIF1-207ENST00000454583 TAF11Q15544 211 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ZNF750Q32MQ0 723 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PRAMEF17Q5VTA0 474 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ANKRD34AQ69YU3 496 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 OOSP2Q86WS3 158 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 POGLUT1Q8NBL1 392 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 NETO1Q8TDF5 533 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 LCN9Q8WX39 176 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 SH3KBP1Q96B97 665 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 THSD1Q9NS62 852 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 NDRG4Q9ULP0 352 aaKnown RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 GPC6Q9Y625 555 aaPredicted RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 C9JVG2 144 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 RTCAO00442 366 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 RFPL3O75679 317 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 SEC14L2O76054 403 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 SYPP08247 313 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 FAM58BPP0C7Q3 252 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 ACP2P11117 423 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 CDK4P11802 303 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 PRPS1L1P21108 318 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 RYKP34925 604 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 PIGAP37287 484 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 DHPSP49366 369 aaPredicted RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 CDK9P50750 372 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 DGKQP52824 942 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 SPEM2Q0P670 501 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 IL10RAQ13651 578 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 CNPY1Q3B7I2 92 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.61□□□□□ -1.67
RIF1-207ENST00000454583 SHQ1Q6PI26 577 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 TAF8Q7Z7C8 310 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 C17orf64Q86WR6 236 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 CLECL1Q8IZS7 167 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 METTL6Q8TCB7 284 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 N4BP2L2Q92802 583 aaPredicted RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 NACC2Q96BF6 587 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 ELP4Q96EB1 424 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 ZNF649Q9BS31 505 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 OSBPL11Q9BXB4 747 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 REXO4Q9GZR2 422 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 COPS7BQ9H9Q2 264 aaPredicted RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 IL1RAPQ9NPH3 570 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 LYARQ9NX58 379 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 MAGEL2Q9UJ55 1249 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 C19orf53Q9UNZ5 99 aaPredicted RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 AP4B1Q9Y6B7 739 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 PHF3Q92576 2039 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 FFAR3O14843 346 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 GPR42O15529 346 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 CCL4P13236 92 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 PCGF2P35227 344 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 ZNF136P52737 540 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 CYP4F3Q08477 520 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 CPSF6Q16630 551 aaKnown RBP eCLIP4.61□□□□□ -1.67
RIF1-207ENST00000454583 LIN52Q52LA3 116 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 TOR1AIP1Q5JTV8 583 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 NDUFAF5Q5TEU4 345 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 RNF220Q5VTB9 566 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 ZNF691Q5VV52 312 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 OR4F3Q6IEY1 312 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 SCIMPQ6UWF3 145 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 OVCH1Q7RTY7 1134 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 CYP4Z1Q86W10 505 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 DHFR2Q86XF0 187 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 SPPL2CQ8IUH8 684 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 FAM46DQ8NEK8 389 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 SREK1Q8WXA9 508 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 MCUR1Q96AQ8 359 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 RGMAQ96B86 450 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 NRBF2Q96F24 287 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 SLC46A1Q96NT5 459 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 ARHGDIGQ99819 225 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 AIF1LQ9BQI0 150 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 MRPS26Q9BYN8 205 aaKnown RBP4.61□□□□□ -1.67
RIF1-207ENST00000454583 ZNF350Q9GZX5 532 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 FANCFQ9NPI8 374 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 HCFC1P51610 2035 aa4.61□□□□□ -1.67
RIF1-207ENST00000454583 FAM227AF5H4B4 570 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms