RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 HEY2Q9UBP5 337 aa13.62□□□□□ -0.23
VPS16-205ENST00000453689 BAIAP2L1Q9UHR4 511 aa13.62□□□□□ -0.23
VPS16-205ENST00000453689 COPG1Q9Y678 874 aaKnown RBP13.62□□□□□ -0.23
VPS16-205ENST00000453689 GCN1Q92616 2671 aaKnown RBP13.62□□□□□ -0.23
VPS16-205ENST00000453689 NBASA2RRP1 2371 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 FCHO1O14526 889 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 PRAMEF2O60811 474 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 ZFAND5O76080 213 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 IDO1P14902 403 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 DDX5P17844 614 aaKnown RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 PRPS1L1P21108 318 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 PIK3R1P27986 724 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 HPCAL1P37235 193 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 RPL3P39023 403 aaKnown RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 CD96P40200 585 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 C21orf58P58505 322 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 ZNF468Q5VIY5 522 aaPredicted RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 TMEM198Q66K66 360 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 SPATA21Q7Z572 469 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 CPLX4Q7Z7G2 160 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 ST13P4Q8IZP2 240 aaPredicted RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 MDS2Q8NDY4 140 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 SUN3Q8TAQ9 357 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 C10orf82Q8WW14 230 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 RBM18Q96H35 190 aaKnown RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 ZNF764Q96H86 408 aaPredicted RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 MARK4Q96L34 752 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 PELOQ9BRX2 385 aaKnown RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 BRINP2Q9C0B6 783 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 REEP4Q9H6H4 257 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 CES1P1Q9UKY3 287 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 PSME2Q9UL46 239 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 TRIM33Q9UPN9 1127 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 MAPRE3Q9UPY8 281 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 EXO1Q9UQ84 846 aaKnown RBP13.61□□□□□ -0.23
VPS16-205ENST00000453689 GPR45Q9Y5Y3 372 aa13.61□□□□□ -0.23
VPS16-205ENST00000453689 TMEM200CA6NKL6 621 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 HRKO00198 91 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 SCAMP2O15127 329 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 AKAP10O43572 662 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 OR10H2O60403 315 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 TBX19O60806 448 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 LRATO95237 230 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 GALNSP34059 522 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 CLDN8P56748 225 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 STX1BP61266 288 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 OC90Q02509 493 aaPredicted RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 KCNC4Q03721 635 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 SF3A3Q12874 501 aaKnown RBP eCLIP13.6□□□□□ -0.234e-11■■■■■ 39.5
VPS16-205ENST00000453689 PDE7AQ13946 482 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 RPS6KA2Q15349 733 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 OR1C1Q15619 314 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 SPRED3Q2MJR0 410 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 PDCD4Q53EL6 469 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 ZNF766Q5HY98 468 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 HSDL2Q6YN16 418 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 C16orf47Q6ZP98 133 aaPredicted RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 ATCAYQ86WG3 371 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 GALNT11Q8NCW6 608 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 OR4K14Q8NGD5 310 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 GRHL3Q8TE85 626 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 DOK4Q8TEW6 326 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 GFM2Q969S9 779 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 KLHL29Q96CT2 875 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 MTERF3Q96E29 417 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 SENP5Q96HI0 755 aaPredicted RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 BARD1Q99728 777 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 ELAC2Q9BQ52 826 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 DPY30Q9C005 99 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 LIN28AQ9H9Z2 209 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 BAHCC1Q9P281 2608 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 COPS7AQ9UBW8 275 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 ATP6V1HQ9UI12 483 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 UTS2RQ9UKP6 389 aa13.6□□□□□ -0.23
VPS16-205ENST00000453689 HELZ2Q9BYK8 2649 aaKnown RBP13.6□□□□□ -0.23
VPS16-205ENST00000453689 NCKAP5O14513 1909 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 CDK2AP1O14519 115 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 ANKRD28O15084 1053 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 DYRK3O43781 588 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 SNX3O60493 162 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 ITGA10O75578 1167 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 ERAL1O75616 437 aaKnown RBP13.59□□□□□ -0.23
VPS16-205ENST00000453689 NEURL1O76050 574 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 IGKV3-11P04433 115 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 SLC35E2P0CK97 266 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 TRHRP34981 398 aaPredicted RBP13.59□□□□□ -0.23
VPS16-205ENST00000453689 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
VPS16-205ENST00000453689 ATP4BP51164 291 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 RNF4P78317 190 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 INAQ16352 499 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 ZNF750Q32MQ0 723 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 METTL21CQ5VZV1 264 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 SPINK14Q6IE38 97 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 ZNF227Q86WZ6 799 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 RIMKLAQ8IXN7 391 aa13.59□□□□□ -0.23
VPS16-205ENST00000453689 SAMD14Q8IZD0 417 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms