RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 GOLGA6L10A6NI86 522 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 SUSD5O60279 629 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 GLRA3O75311 464 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 ESRRBO95718 433 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 SHBGP04278 402 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 CHN1P15882 459 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 CSNK2A2P19784 350 aaPredicted RBP17.85■□□□□ 0.45
USP40-207ENST00000450940 SOX18P35713 384 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 MAGEA5P43359 124 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 NAA20P61599 178 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 PRICKLE4Q2TBC4 344 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 DCHS2Q6V1P9 2916 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 TRILQ7L0X0 811 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 MMP21Q8N119 569 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 MARVELD2Q8N4S9 558 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 OR10G3Q8NGC4 313 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 CTHRC1Q96CG8 243 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 C11orf24Q96F05 449 aaPredicted RBP17.85■□□□□ 0.45
USP40-207ENST00000450940 ZNF681Q96N22 645 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 ACPTQ9BZG2 426 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 SIRT5Q9NXA8 310 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 ABCA12Q86UK0 2595 aa17.85■□□□□ 0.45
USP40-207ENST00000450940 FREM3P0C091 2139 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 CAPN14A8MX76 684 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 PROCP04070 461 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 PRF1P14222 555 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 NT5EP21589 574 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 HMOX2P30519 316 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 RAE1P78406 368 aaKnown RBP17.84■□□□□ 0.45
USP40-207ENST00000450940 SLC10A1Q14973 349 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 TMEM211Q6ICI0 200 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 GALNT18Q6P9A2 607 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 ZYG11AQ6WRX3 759 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 LRRC25Q8N386 305 aaPredicted RBP17.84■□□□□ 0.45
USP40-207ENST00000450940 NTNG2Q96CW9 530 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 FAIM2Q9BWQ8 316 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 RUBCNLQ9H714 662 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 ZFP64Q9NPA5 681 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 MAT2BQ9NZL9 334 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 NPFFR2Q9Y5X5 522 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 LIPGQ9Y5X9 500 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 ADGRG4Q8IZF6 3080 aa17.84■□□□□ 0.45
USP40-207ENST00000450940 CCDC151A5D8V7 595 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 FOXO6A8MYZ6 492 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 AQP7O14520 342 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 UBFD1O14562 309 aaKnown RBP17.83■□□□□ 0.44
USP40-207ENST00000450940 BCKDKO14874 412 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 HCN1O60741 890 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 DRD2P14416 443 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 CRHR1P34998 444 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 DEKP35659 375 aaKnown RBP17.83■□□□□ 0.44
USP40-207ENST00000450940 HTR6P50406 440 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 CCDC153Q494R4 210 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 GXYLT1Q4G148 440 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 TBCELQ5QJ74 424 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 HLA-DQA1Q5Y7H0 255 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 VWA5B2Q8N398 1253 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 FAM13CQ8NE31 585 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 CNRIP1Q96F85 164 aaPredicted RBP17.83■□□□□ 0.44
USP40-207ENST00000450940 SECISBP2Q96T21 854 aaKnown RBP17.83■□□□□ 0.44
USP40-207ENST00000450940 QPCTLQ9NXS2 382 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 HEY2Q9UBP5 337 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 GRID1Q9ULK0 1009 aa17.83■□□□□ 0.44
USP40-207ENST00000450940 BOKQ9UMX3 212 aaPredicted RBP17.83■□□□□ 0.44
USP40-207ENST00000450940 FBN2P35556 2912 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 LRRC3CA6NJW4 275 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 NPIPA2E9PIF3 369 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 NPIPA3F8WFD2 350 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 H3BQF6 201 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 TP53I11O14683 189 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 PLIN3O60664 434 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 TRIM3O75382 744 aaPredicted RBP17.82■□□□□ 0.44
USP40-207ENST00000450940 ERAL1O75616 437 aaKnown RBP17.82■□□□□ 0.44
USP40-207ENST00000450940 CELA3AP09093 270 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 RFPL3SP0C7P2 107 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 MYL2P10916 166 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 NAGAP17050 411 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 GPX3P22352 226 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 PTGER4P35408 488 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 FEN1P39748 380 aaKnown RBP17.82■□□□□ 0.44
USP40-207ENST00000450940 CCT5P48643 541 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 DNAJB13P59910 316 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 KCNJ2P63252 427 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 DUSP2Q05923 314 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 DUSP8Q13202 625 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 RPS6KA2Q15349 733 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 SPIN4Q56A73 249 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 C6orf163Q5TEZ5 329 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 PRAMEF20Q5VT98 475 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 FAM111BQ6SJ93 734 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 TMEM64Q6YI46 380 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 ACBD4Q8NC06 268 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 UBLCP1Q8WVY7 318 aaPredicted RBP17.82■□□□□ 0.44
USP40-207ENST00000450940 KLHL29Q96CT2 875 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 KCNA7Q96RP8 456 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 SMC6Q96SB8 1091 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 ZNF703Q9H7S9 590 aaPredicted RBP17.82■□□□□ 0.44
USP40-207ENST00000450940 ACKR4Q9NPB9 350 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 CFL2Q9Y281 166 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 DLGAP4Q9Y2H0 992 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms