RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ASIC5Q9NY37 505 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 MAPRE3Q9UPY8 281 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 WBP11Q9Y2W2 641 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 MMACHCQ9Y4U1 282 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 DIDO1Q9BTC0 2240 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 RTCAO00442 366 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 SCELO95171 688 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 UNC5CO95185 931 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 ANXA4P09525 319 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 TPP2P29144 1249 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 ASMTP46597 345 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 MAPK12P53778 367 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 LIM2P55344 173 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 STX1BP61266 288 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 SLC13A2Q13183 592 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 SLAMF1Q13291 335 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 INAQ16352 499 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 C4orf17Q53FE4 359 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 IL23RQ5VWK5 629 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 SCUBE1Q8IWY4 988 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 ACOT4Q8N9L9 421 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 THAP3Q8WTV1 239 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 FCRL1Q96LA6 429 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 C1orf50Q9BV19 199 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 MS4A12Q9NXJ0 267 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 GIMAP2Q9UG22 337 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 PHF11Q9UIL8 331 aa15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 POLR3HQ9Y535 204 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-204ENST00000450303 CROCCQ5TZA2 2017 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 WIPF3A6NGB9 483 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 E9PBE3 544 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 CLDN4O14493 209 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 CCDC22O60826 627 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 CLDN1O95832 211 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 CRYABP02511 175 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 IDO1P14902 403 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 NCF2P19878 526 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 COL8A1P27658 744 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 ZNF763Q0D2J5 394 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 SPRED3Q2MJR0 410 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 C1QL3Q5VWW1 255 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 GFRALQ6UXV0 394 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 ZNF793Q6ZN11 406 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 ADAMTS18Q8TE60 1221 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 FAIM2Q9BWQ8 316 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 SORBS1Q9BX66 1292 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 EBPLQ9BY08 206 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 ZNF717Q9BY31 904 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 DEFB126Q9BYW3 111 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 LYRM4Q9HD34 91 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 LRFN1Q9P244 771 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 HEY2Q9UBP5 337 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 DAPP1Q9UN19 280 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 CLDN16Q9Y5I7 305 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 NAV2Q8IVL1 2488 aa15.86■□□□□ 0.13
PRPF40A-204ENST00000450303 A0A0A6YYD5 115 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 TRBV11-1A0A0K0K1C0 115 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 CYR61O00622 381 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 EEDO75530 441 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 FAM58BPP0C7Q3 252 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 BCKDHAP12694 445 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 CD46P15529 392 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 DDX5P17844 614 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 TLX1P31314 330 aaPredicted RBP15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 HSD17B7P56937 341 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 MLF1P58340 268 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 RAE1P78406 368 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 FBXW10Q5XX13 1052 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 GALNTL5Q7Z4T8 443 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 MTDHQ86UE4 582 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 FJX1Q86VR8 437 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 ZNF595Q8IYB9 648 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 TMEM132CQ8N3T6 1108 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 LIX1Q8N485 282 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 DNAJB8Q8NHS0 232 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 C11orf24Q96F05 449 aaPredicted RBP15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 MAPKAP1Q9BPZ7 522 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 WDR41Q9HAD4 459 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 AIG1Q9NVV5 245 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 KCMF1Q9P0J7 381 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 SEC14L3Q9UDX4 400 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 FBXW2Q9UKT8 454 aa15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 MRPS33Q9Y291 106 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-204ENST00000450303 NEURL1O76050 574 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 GBAP04062 536 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 IFNA16P05015 189 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 SP1P08047 785 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 CPN2P22792 545 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 RPL3P39023 403 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 BUD31P41223 144 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 ATP4BP51164 291 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 CLCN2P51788 898 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 KRT72Q14CN4 511 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 HEPACAMQ14CZ8 416 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 SNCBQ16143 134 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 MAPKAPK3Q16644 382 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 SLC25A25Q6KCM7 469 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 MYO7BQ6PIF6 2116 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 IKBIPQ70UQ0 350 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 GPR180Q86V85 440 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms