RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SEC22BO75396 215 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 RSL1D1O76021 490 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 TROVE2P10155 538 aaKnown RBP eCLIP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 PTGS2P35354 604 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 KIR3DL1P43629 444 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 STXBP1P61764 594 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 CUL3Q13618 768 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 TERF2Q15554 542 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 RFTN2Q52LD8 501 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 RNFT1Q5M7Z0 435 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 C10orf62Q5T681 223 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 TMEM198Q66K66 360 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 NXNQ6DKJ4 435 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 TMEM211Q6ICI0 200 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 CHSY3Q70JA7 882 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 COMMD6Q7Z4G1 85 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 MTERF4Q7Z6M4 381 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 ZNF227Q86WZ6 799 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 CHERPQ8IWX8 916 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 KIRREL3Q8IZU9 778 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 METTL4Q8N3J2 472 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 CPSF7Q8N684 471 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 C16orf52Q8NHV5 167 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 CA5BP1Q8WTZ4 195 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 CHTF18Q8WVB6 975 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 SEC16BQ96JE7 1060 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 DMRTA2Q96SC8 542 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 NPLQ9BXD5 320 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 ENKD1Q9H0I2 346 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 C1orf109Q9NX04 203 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 PPT2Q9UMR5 302 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 DLGAP4Q9Y2H0 992 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 FBN2P35556 2912 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 C19orf84I3L1E1 186 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 CLDN4O14493 209 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 TFECO14948 347 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 TMPRSS11DO60235 418 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 SEMA3DO95025 777 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 TGDSO95455 350 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 KLK1P06870 262 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 MAOAP21397 527 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 PRPH2P23942 346 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 ATP5A1P25705 553 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 SSR2P43308 183 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 RIPPLY3P57055 190 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 CBX1P83916 185 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 KIAA0040Q15053 153 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 LSM12Q3MHD2 195 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 C6orf136Q5SQH8 315 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 OR4C11Q6IEV9 310 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 LARP4Q71RC2 724 aaKnown RBP eCLIP12.76□□□□□ -0.376e-7■■□□□ 13.2
PDLIM2-213ENST00000448520 CPLX4Q7Z7G2 160 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 SULF2Q8IWU5 870 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 TMEM156Q8N614 296 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 C10orf82Q8WW14 230 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 RGMAQ96B86 450 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 MAELQ96JY0 434 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 NECTIN3Q9NQS3 549 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 PSD3Q9NYI0 1048 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 PPIEQ9UNP9 301 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 DCHS2Q6V1P9 2916 aa12.76□□□□□ -0.37
PDLIM2-213ENST00000448520 ADGRG4Q8IZF6 3080 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 A0A088AWK7 358 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 A0A0A6YYD5 115 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 A8MUA0 341 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 E9PBE3 544 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ADAM10O14672 748 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 PEX1O43933 1283 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ZNF10P21506 573 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 TACR1P25103 407 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 MEOX1P50221 254 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 HSD17B7P56937 341 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 HSF1Q00613 529 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ACSM2AQ08AH3 577 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 RUNX2Q13950 521 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 CDSNQ15517 529 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ATP6AP1LQ52LC2 224 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ACSM2BQ68CK6 577 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 PAOXQ6QHF9 649 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 SPATA21Q7Z572 469 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 MMP21Q8N119 569 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 CA13Q8N1Q1 262 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ACOT4Q8N9L9 421 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 FNDC5Q8NAU1 212 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ACBD4Q8NC06 268 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 APCDD1LQ8NCL9 501 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 CLHC1Q8NHS4 586 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 FAM57AQ8TBR7 257 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 NUDT8Q8WV74 236 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 ASB5Q8WWX0 329 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 UCN3Q969E3 161 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 SDCCAG3Q96C92 435 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 C11orf24Q96F05 449 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms