RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TFECO14948 347 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 AZIN1O14977 448 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 TYROBPO43914 113 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 NPHS1O60500 1241 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 SEC22BO75396 215 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 P04436 131 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 CHRNGP07510 517 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 FGF4P08620 206 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 FBXO45P0C2W1 286 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 NR0B1P51843 470 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 C2orf80Q0P641 193 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 DUSP8Q13202 625 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 HEPACAMQ14CZ8 416 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 EXOSC7Q15024 291 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 LTB4RQ15722 352 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 C3AR1Q16581 482 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 PRSS53Q2L4Q9 553 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 TRMT12Q53H54 448 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 CMPK2Q5EBM0 449 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 C6orf163Q5TEZ5 329 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 HLA-DQA1Q5Y7H0 255 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 SLC22A10Q63ZE4 541 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 BNC2Q6ZN30 1099 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 Q6ZPB1 254 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 FGD2Q7Z6J4 655 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 CHERPQ8IWX8 916 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 GHDCQ8N2G8 530 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 LRRC25Q8N386 305 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 VWA5B2Q8N398 1253 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 OR52N2Q8NGI0 321 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 EXOSC8Q96B26 276 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 ZBTB9Q96C00 473 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 FAM173AQ9BQD7 235 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 DEFB127Q9H1M4 99 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 TUBB1Q9H4B7 451 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 SH3BGRL2Q9UJC5 107 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 FIS1Q9Y3D6 152 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 NCKAP5O14513 1909 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 EXPH5Q8NEV8 1989 aa11.75□□□□□ -0.53
PRPF40A-203ENST00000448428 SLC28A1O00337 649 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 CCL21O00585 134 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 RGS16O15492 202 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 ZG16O60844 167 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 RSL1D1O76021 490 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PDE9AO76083 593 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 CLDN1O95832 211 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 CBX7O95931 251 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 TUBBP07437 444 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PCSK2P16519 638 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PRPH2P23942 346 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PIGAP37287 484 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 GSTM5P46439 218 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 DNASE1L1P49184 302 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PER3P56645 1201 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PPIAP62937 165 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PLGLB1Q02325 96 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF763Q0D2J5 394 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 FOXO1Q12778 655 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 KIAA0040Q15053 153 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 UGT3A2Q3SY77 523 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 ARL13AQ5H913 290 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 KANK2Q63ZY3 851 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 HIST2H2BCQ6DN03 193 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 FAM71E1Q6IPT2 247 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 NOXRED1Q6NXP6 359 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 Q6ZSR9 355 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 ZCCHC23Q6ZST2 131 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 FAM47EQ6ZV65 393 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 DND1Q8IYX4 353 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 TAGAPQ8N103 731 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 FAM13CQ8NE31 585 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 OR10G3Q8NGC4 313 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 OR5M3Q8NGP4 307 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 OR2T11Q8NH01 316 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 FAM76AQ8TAV0 307 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PAQR8Q8TEZ7 354 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 MAGED4Q96JG8 741 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 TTTY12Q9BZ98 90 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PROK2Q9HC23 129 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 PFDN4Q9NQP4 134 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 SLC35C2Q9NQQ7 365 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 TUBA8Q9NY65 449 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 SENP1Q9P0U3 644 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 BCAP29Q9UHQ4 241 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 EXO1Q9UQ84 846 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 DTX4Q9Y2E6 619 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 TRAF6Q9Y4K3 522 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 POLR3HQ9Y535 204 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 DNAJC15Q9Y5T4 150 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 NPFFR2Q9Y5X5 522 aa11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 CHCHD2Q9Y6H1 151 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-203ENST00000448428 FLNBO75369 2602 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-203ENST00000448428 A0A1B0GTH9 108 aa11.73□□□□□ -0.53
PRPF40A-203ENST00000448428 FAM166BA8MTA8 275 aa11.73□□□□□ -0.53
PRPF40A-203ENST00000448428 TMEM233B4DJY2 109 aa11.73□□□□□ -0.53
PRPF40A-203ENST00000448428 NPIPB8E9PQR5 432 aa11.73□□□□□ -0.53
PRPF40A-203ENST00000448428 RGS14O43566 566 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms