RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ZFYVE19Q96K21 471 aa12.21□□□□□ -0.45
SHC1-210ENST00000448116 COQ10AQ96MF6 247 aa12.21□□□□□ -0.45
SHC1-210ENST00000448116 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
SHC1-210ENST00000448116 B3GNT4Q9C0J1 378 aa12.21□□□□□ -0.45
SHC1-210ENST00000448116 RACGAP1Q9H0H5 632 aa12.21□□□□□ -0.45
SHC1-210ENST00000448116 QRSL1Q9H0R6 528 aaKnown RBP12.21□□□□□ -0.45
SHC1-210ENST00000448116 SLC23A2Q9UGH3 650 aa12.21□□□□□ -0.45
SHC1-210ENST00000448116 CMAHPQ9Y471 501 aa12.21□□□□□ -0.45
SHC1-210ENST00000448116 A0A1W2PQL4 384 aaPredicted RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 FABP12A6NFH5 140 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 EPHX1P07099 455 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 PTPN2P17706 415 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 MYL12AP19105 171 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 S100A1P23297 94 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 ETV5P41161 510 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 ETV1P50549 477 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 ERVFC1P60507 584 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 ALDH6A1Q02252 535 aaKnown RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 LARS2Q15031 903 aaKnown RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 DHCR24Q15392 516 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 TBRG1Q3YBR2 411 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 CRTC2Q53ET0 693 aaPredicted RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 PYDC2Q56P42 97 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 MEDAGQ5VYS4 303 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 COMTD1Q86VU5 262 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 TRIM48Q8IWZ4 208 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 UBQLNLQ8IYU4 475 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 SYT14Q8NB59 555 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 PLA2G15Q8NCC3 412 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 SETD7Q8WTS6 366 aaKnown RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 SLC9A6Q92581 669 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 ZBED6CLQ96FA7 236 aaPredicted RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 TTYH2Q9BSA4 534 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 C3orf14Q9HBI5 128 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 A4GALTQ9NPC4 353 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 NFKBIL1Q9UBC1 381 aaPredicted RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 HCN2Q9UL51 889 aa12.21□□□□□ -0.46
SHC1-210ENST00000448116 LSM2Q9Y333 95 aaKnown RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 HELZP42694 1942 aaKnown RBP12.21□□□□□ -0.46
SHC1-210ENST00000448116 CENPXA8MT69 81 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 ZNF670-ZNF695F2Z2N8 137 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 FRS3O43559 492 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 MOSPD3O75425 235 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 PIPP12273 146 aaPredicted RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 MMP11P24347 488 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 SDC2P34741 201 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 RFPL4BQ6ZWI9 263 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 GRASPQ7Z6J2 395 aaPredicted RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 ZER1Q7Z7L7 766 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 LAPTM4BQ86VI4 370 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 AMZ2Q86W34 360 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 C12orf40Q86WS4 652 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 FAM129CQ86XR2 697 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 FBXO15Q8NCQ5 510 aaPredicted RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 OTULINQ96BN8 352 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 SLC35G5Q96KT7 338 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 NELL2Q99435 816 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 TM9SF2Q99805 663 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 C17orf62Q9BQA9 187 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 FAM83CQ9BQN1 747 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 OSGEPL1Q9H4B0 414 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 TXNL4BQ9NX01 149 aaKnown RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 DSPPQ9NZW4 1301 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 TSPAN11A1L157 253 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 TBX6O95947 436 aaPredicted RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 CH25HO95992 272 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 EIF2S1P05198 315 aaKnown RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 C8orf89P0DMQ9 161 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 ACADLP28330 430 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 PPP2R1BP30154 601 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 BSGP35613 385 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 SSR2P43308 183 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 RFX2P48378 723 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 GIPRP48546 466 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 PROKR2Q8NFJ6 384 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 OR52I1Q8NGK6 324 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 OR6F1Q8NGZ6 308 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 APOBEC4Q8WW27 367 aaKnown RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 NXPE3Q969Y0 559 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 BBS4Q96RK4 519 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 SERHL2Q9H4I8 314 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 XKR8Q9H6D3 395 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 EGLN3Q9H6Z9 239 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 EQTNQ9NQ60 294 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 COMMD3Q9UBI1 195 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 ICKQ9UPZ9 632 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 V9GYH0 126 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 PRAMEF27A3QJZ7 478 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 PRNPP04156 253 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 ETV6P41212 452 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 SMIM11AP58511 58 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 RACK1P63244 317 aaKnown RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 PSPHP78330 225 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 SCN1BQ07699 218 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 LASP1Q14847 261 aaKnown RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 ZNF79Q15937 498 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 ZNF750Q32MQ0 723 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 GPAT3Q53EU6 434 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms