RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 HTR1EP28566 365 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 CBLBQ13191 982 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 GAS6Q14393 721 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 SLC36A3Q495N2 470 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 PKDCCQ504Y2 493 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 THOC7Q6I9Y2 204 aaKnown RBP16.95■□□□□ 0.3
ATG9A-215ENST00000446716 FAM180BQ6P0A1 224 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 RTN4RL1Q86UN2 441 aaPredicted RBP16.95■□□□□ 0.3
ATG9A-215ENST00000446716 MYRFLQ96LU7 910 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 UBE2NP61088 152 aaKnown RBP16.95■□□□□ 0.3
ATG9A-215ENST00000446716 CARTPTQ16568 116 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 ZNF227Q86WZ6 799 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 AGBL5Q8NDL9 886 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 PTERQ96BW5 349 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 TMEM41AQ96HV5 264 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 RADILQ96JH8 1075 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 SFXN2Q96NB2 322 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 MTHFD2LQ9H903 347 aaPredicted RBP16.95■□□□□ 0.3
ATG9A-215ENST00000446716 CLCN2P51788 898 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 SMIM14Q96QK8 99 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 ITPAQ9BY32 194 aa16.95■□□□□ 0.3
ATG9A-215ENST00000446716 MTRF1O75570 445 aaKnown RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 ZNF432O94892 652 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 PRKCAP17252 672 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CCR7P32248 378 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 ENTPD1P49961 510 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 EXOC3L2Q2M3D2 409 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 ALG10BQ5I7T1 473 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CDRT4Q8N9R6 151 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CXXC1Q9P0U4 656 aaPredicted RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 GJE1A6NN92 205 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 SOBPA7XYQ1 873 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CACNG3O60359 315 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 ZNF28P17035 718 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 F8A1P23610 371 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 AFF3P51826 1226 aaKnown RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 HSF5Q4G112 596 aaPredicted RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 ZNF611Q8N823 705 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 ZNF559Q9BR84 538 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 POT1Q9NUX5 634 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 GXYLT2A0PJZ3 443 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 ARHGEF15O94989 841 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CPNE6O95741 557 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 PDHA2P29803 388 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CLCA4Q14CN2 919 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 TRIM61Q5EBN2 209 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 DGLUCYQ7Z3D6 616 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 OR52N2Q8NGI0 321 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 C15orf40Q8WUR7 153 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 TM9SF4Q92544 642 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CXCL16Q9H2A7 254 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 OBP2AQ9NY56 170 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 KCMF1Q9P0J7 381 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 EXOSC1Q9Y3B2 195 aaKnown RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 A0A0G2JPF8 293 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 A6NLC8 198 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 HNRNPCL3B7ZW38 293 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 NUAK1O60285 661 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 FAM189A1O60320 539 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 HNRNPCL4P0DMR1 293 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 CTHP32929 405 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 GGT2P36268 569 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 PRLHRP49683 370 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 MAD2L1BPQ15013 274 aaPredicted RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 OCLNQ16625 522 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 LETMD1Q6P1Q0 360 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 MAMDC2Q7Z304 686 aaPredicted RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 VWA5B2Q8N398 1253 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 NXPE2Q96DL1 559 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 MS4A4EQ96PG1 132 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 UBE2ZQ9H832 354 aaPredicted RBP16.94■□□□□ 0.3
ATG9A-215ENST00000446716 RDH14Q9HBH5 336 aa16.94■□□□□ 0.3
ATG9A-215ENST00000446716 A0A1B0GTW7 788 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 GPR39O43194 453 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 SEMA3DO95025 777 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 TREML1Q86YW5 311 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 SLC15A3Q8IY34 581 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 PHF7Q9BWX1 381 aaPredicted RBP16.93■□□□□ 0.3
ATG9A-215ENST00000446716 DMRT3Q9NQL9 472 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 PLEKHA6Q9Y2H5 1048 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 TMEM14AQ9Y6G1 99 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 CITO14578 2027 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 CBFA2T3O75081 653 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 PRLP01236 227 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 SOX2P48431 317 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 MEP1AQ16819 746 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 LIX1LQ8IVB5 337 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 ACOT4Q8N9L9 421 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 THAP4Q8WY91 577 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 TANKQ92844 425 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 CCNL2Q96S94 520 aaPredicted RBP16.93■□□□□ 0.3
ATG9A-215ENST00000446716 ARNT2Q9HBZ2 717 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 SLC22A1O15245 554 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 RHCEP18577 417 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 NAA10P41227 235 aaPredicted RBP16.93■□□□□ 0.3
ATG9A-215ENST00000446716 SPIN3Q5JUX0 258 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 MSANTD1Q6ZTZ1 278 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 OR8K3Q8NH51 312 aa16.93■□□□□ 0.3
ATG9A-215ENST00000446716 ARRDC3Q96B67 414 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms