RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 SEMA3DO95025 777 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 PCDH8O95206 1070 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 SLC2A10O95528 541 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 ACP5P13686 325 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 ATP6V1E1P36543 226 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 LIMS1P48059 325 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 RORCP51449 518 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 DUSP2Q05923 314 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 TMEM107Q6UX40 140 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CAMKMTQ7Z624 323 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 ATP6V1C2Q8NEY4 427 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 C11orf54Q9H0W9 315 aaPredicted RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 TXNL4BQ9NX01 149 aaKnown RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CCDC59Q9P031 241 aaKnown RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 GPR55Q9Y2T6 319 aaPredicted RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 V9GYH0 126 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 PTX3P26022 381 aaPredicted RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CSTF2P33240 577 aaKnown RBP eCLIP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 RFX3P48380 749 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CAMK1Q14012 370 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 DHCR24Q15392 516 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 PDZK1Q5T2W1 519 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 KHDRBS2Q5VWX1 349 aaKnown RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 IL20RBQ6UXL0 311 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 VASH1Q7L8A9 365 aaPredicted RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 OR6F1Q8NGZ6 308 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 OR52P1PQ8NH57 321 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 SMPDL3AQ92484 453 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 FAM46AQ96IP4 442 aaKnown RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 RAD9AQ99638 391 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CDCA4Q9BXL8 241 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 C6orf106Q9H6K1 298 aaPredicted RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 KLK4Q9Y5K2 254 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CD8B2A6NJW9 211 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 NDUFB5O43674 189 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 SCG5P05408 212 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CD8BP10966 210 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 CEBPBP17676 345 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 LAG3P18627 525 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 GPR4P46093 362 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 WDR5P61964 334 aaKnown RBP17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 RBBP4Q09028 425 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 NOGQ13253 232 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 PDE7AQ13946 482 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 P2RY14Q15391 338 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 SMARCD3Q6STE5 483 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 DPPA4Q7L190 304 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 PDZD3Q86UT5 571 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 OR52I1Q8NGK6 324 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 DEPDC7Q96QD5 511 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 TMEM246Q9BRR3 403 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 SGPP1Q9BX95 441 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 MKLN1Q9UL63 735 aa17.92■□□□□ 0.46
PAXBP1-204ENST00000443785 MEIOCA2RUB1 952 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 E9PQ18 207 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 CAPN5O15484 640 aaPredicted RBP17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 LALBAP00709 142 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 CXCL10P02778 98 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 DDCP20711 480 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 C18orf63Q68DL7 685 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 SLC39A5Q6ZMH5 540 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 VRK2Q86Y07 508 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 BBS1Q8NFJ9 593 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 PDXPQ96GD0 296 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 TEFMQ96QE5 360 aaKnown RBP17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 DPH7Q9BTV6 452 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 RMI1Q9H9A7 625 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 SIRT3Q9NTG7 399 aaPredicted RBP17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 CACNA1IQ9P0X4 2223 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 LILRB5O75023 590 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 ADH1AP07327 375 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 SNRPNP63162 240 aaKnown RBP17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 EIF4HQ15056 248 aaKnown RBP17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 TIMM50Q3ZCQ8 353 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 SYT14P1Q58G82 188 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 UNC5DQ6UXZ4 953 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 RAB43Q86YS6 212 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 OR4N5Q8IXE1 308 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 CHAC2Q8WUX2 184 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 BBS4Q96RK4 519 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 ZNF717Q9BY31 904 aaPredicted RBP17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 NXF2Q9GZY0 626 aaKnown RBP17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 LHX9Q9NQ69 397 aa17.91■□□□□ 0.46
PAXBP1-204ENST00000443785 IGLON5A6NGN9 336 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 HOXB6P17509 224 aaKnown RBP17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 ID2Q02363 134 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 LARS2Q15031 903 aaKnown RBP17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 SLC35F1Q5T1Q4 408 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 NDUFAF5Q5TEU4 345 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 FAM129CQ86XR2 697 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 GALNT12Q8IXK2 581 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 GOT1L1Q8NHS2 421 aaPredicted RBP17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 TAPBPLQ9BX59 468 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 ZBP1Q9H171 429 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 GLIPR2Q9H4G4 154 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 CSNK1G3Q9Y6M4 447 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 SPTBP11277 2137 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 MSL3P1P0C860 447 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 PSKH1P11801 424 aa17.9■□□□□ 0.46
PAXBP1-204ENST00000443785 SLC16A1P53985 500 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms