RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 MCM8Q9UJA3 840 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 CNOT11Q9UKZ1 510 aaKnown RBP17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 TIMM22Q9Y584 194 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 LIPGQ9Y5X9 500 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 HNRNPRO43390 633 aaKnown RBP17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 TPOP07202 933 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 NT5EP21589 574 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 HTR1EP28566 365 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 HMOX2P30519 316 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 CRHR1P34998 444 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 SLCO1A2P46721 670 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 FOXA1P55317 472 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 MAP4K2Q12851 820 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 DUSP8Q13202 625 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 PAOXQ6QHF9 649 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 GBP7Q8N8V2 638 aaPredicted RBP17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 C17orf47Q8NEP4 570 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 MARVELD3Q96A59 401 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 CTHRC1Q96CG8 243 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 CCDC126Q96EE4 140 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 CNRIP1Q96F85 164 aaPredicted RBP17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 APIPQ96GX9 242 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 ANKZF1Q9H8Y5 726 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 MAT2BQ9NZL9 334 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 DTX4Q9Y2E6 619 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 ABCA12Q86UK0 2595 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 CREBBPQ92793 2442 aa17.41■□□□□ 0.38
HMGB3P22-201ENST00000442010 INTS1Q8N201 2190 aaKnown RBP17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 GOLGA6L10A6NI86 522 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 LRRC3CA6NJW4 275 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 PLIN3O60664 434 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 CELA3AP09093 270 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 MYL2P10916 166 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 PRF1P14222 555 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 CSNK2A2P19784 350 aaPredicted RBP17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 GPX3P22352 226 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 FEN1P39748 380 aaKnown RBP17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 HMGCS1Q01581 520 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 PRAMEF20Q5VT98 475 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 GALNT18Q6P9A2 607 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 FAM111BQ6SJ93 734 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 TRILQ7L0X0 811 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 TAGAPQ8N103 731 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 EID3Q8N140 333 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 EPS8L3Q8TE67 593 aaKnown RBP17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 NTNG2Q96CW9 530 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 FAIM2Q9BWQ8 316 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 SIRT5Q9NXA8 310 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 CNIH4Q9P003 139 aa17.4■□□□□ 0.38
HMGB3P22-201ENST00000442010 ANKRD33BA6NCL7 494 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 OR14I1A6ND48 311 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 ERAL1O75616 437 aaKnown RBP17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 CLDN14O95500 239 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 RFPL3SP0C7P2 107 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 DEKP35659 375 aaKnown RBP17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 CCT5P48643 541 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 DNAJB13P59910 316 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 NAA20P61599 178 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 SLC18A2Q05940 514 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 CCDC153Q494R4 210 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 SPIN4Q56A73 249 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 FAM180BQ6P0A1 224 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 TMEM64Q6YI46 380 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 VWA5B2Q8N398 1253 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 SIMC1Q8NDZ2 872 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 FAM13CQ8NE31 585 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 KLHL29Q96CT2 875 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 TP63Q9H3D4 680 aaPredicted RBP17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 C12orf65Q9H3J6 166 aaKnown RBP17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 ZNF703Q9H7S9 590 aaPredicted RBP17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 MID1IP1Q9NPA3 183 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 CHST11Q9NPF2 352 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 GRID1Q9ULK0 1009 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 NPFFR2Q9Y5X5 522 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 APCP25054 2843 aa17.39■□□□□ 0.37
HMGB3P22-201ENST00000442010 CSMD1Q96PZ7 3565 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 ADGRG4Q8IZF6 3080 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 NPIPA2E9PIF3 369 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 NPIPA3F8WFD2 350 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 C19orf84I3L1E1 186 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 PCDH7O60245 1069 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 SUSD5O60279 629 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 CBX7O95931 251 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 IL3P08700 152 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 KRT15P19012 456 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 TIA1P31483 386 aaKnown RBP eCLIP17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 FBXW4P57775 412 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 RPS6KA2Q15349 733 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 CEBPEQ15744 281 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 GXYLT1Q4G148 440 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 HLA-DQA1Q5Y7H0 255 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 FRMD7Q6ZUT3 714 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 LRRC25Q8N386 305 aaPredicted RBP17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 RPRMLQ8N4K4 120 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 CCNYL1Q8N7R7 359 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 ADCY4Q8NFM4 1077 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 SMC6Q96SB8 1091 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 BRINP2Q9C0B6 783 aa17.38■□□□□ 0.37
HMGB3P22-201ENST00000442010 NXF5Q9H1B4 397 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms