RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 EXOSC6Q5RKV6 272 aaKnown RBP17.6■□□□□ 0.41
POLR1E-203ENST00000442009 CEP68Q76N32 757 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 GATAD2AQ86YP4 633 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 TTC29Q8NA56 475 aaPredicted RBP17.6■□□□□ 0.41
POLR1E-203ENST00000442009 DTWD2Q8NBA8 298 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 OR4C6Q8NH72 309 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 RDH12Q96NR8 316 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 DUSP23Q9BVJ7 150 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 RUBCNLQ9H714 662 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 SMURF2Q9HAU4 748 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 SOHLH2Q9NX45 425 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 PTGFRNQ9P2B2 879 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 GPC6Q9Y625 555 aaPredicted RBP17.6■□□□□ 0.41
POLR1E-203ENST00000442009 U3KQA8 63 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 ADAMTS9Q9P2N4 1935 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 VPS13AQ96RL7 3174 aa17.6■□□□□ 0.41
POLR1E-203ENST00000442009 EIF4E1BA6NMX2 242 aaKnown RBP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 PDE9AO76083 593 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 DNAJA1P31689 397 aaKnown RBP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 HOXD12P35452 270 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 HSD11B2P80365 405 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 PUM1Q14671 1186 aaKnown RBP eCLIP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 PRAMEF8Q5VWM4 474 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 PRAMEF7Q5VXH5 474 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 FAM111BQ6SJ93 734 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 USP51Q70EK9 711 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 SZRD1Q7Z422 152 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 GPR32P1Q8NGA4 272 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 SLC41A2Q96JW4 573 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 OR7D2Q96RA2 312 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 BARD1Q99728 777 aaKnown RBP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 RBM4BQ9BQ04 359 aaKnown RBP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 RBM4Q9BWF3 364 aaKnown RBP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 SPRTNQ9H040 489 aaPredicted RBP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 CAPN10Q9HC96 672 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 TMEM9Q9P0T7 183 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 IFT80Q9P2H3 777 aaPredicted RBP17.59■□□□□ 0.41
POLR1E-203ENST00000442009 TRPC4Q9UBN4 977 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 BAG5Q9UL15 447 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 KCNE3Q9Y6H6 103 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 U3KQV3 271 aa17.59■□□□□ 0.41
POLR1E-203ENST00000442009 TTC28Q96AY4 2481 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 A0A087WV62 115 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 SLITRK5O94991 958 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 MSL3P1P0C860 447 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 TNFRSF1BP20333 461 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 GCGRP47871 477 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 SKP1P63208 163 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 MYBPC1Q00872 1141 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 ID2Q02363 134 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 ANKRD34AQ69YU3 496 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 PRSS42Q7Z5A4 293 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 SLC44A2Q8IWA5 706 aaPredicted RBP17.58■□□□□ 0.41
POLR1E-203ENST00000442009 D2HGDHQ8N465 521 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 DHRSXQ8N5I4 330 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 SMYD1Q8NB12 490 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 SIMC1Q8NDZ2 872 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 SPPL2AQ8TCT8 520 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 ZNF675Q8TD23 568 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 GEMIN6Q8WXD5 167 aaKnown RBP17.58■□□□□ 0.41
POLR1E-203ENST00000442009 COL26A1Q96A83 441 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 CTHRC1Q96CG8 243 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 ZNF300Q96RE9 604 aaPredicted RBP17.58■□□□□ 0.41
POLR1E-203ENST00000442009 YIPF4Q9BSR8 244 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 ACTRT3Q9BYD9 372 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 FSCN3Q9NQT6 498 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 KLHL3Q9UH77 587 aa17.58■□□□□ 0.41
POLR1E-203ENST00000442009 TMEFF2Q9UIK5 374 aaPredicted RBP17.58■□□□□ 0.41
POLR1E-203ENST00000442009 C19orf53Q9UNZ5 99 aaPredicted RBP17.58■□□□□ 0.41
POLR1E-203ENST00000442009 A0A0C4DFX4 3053 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 H0YAE9 185 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 CASC3O15234 703 aaKnown RBP17.58■□□□□ 0.4
POLR1E-203ENST00000442009 SLC28A2O43868 658 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 PLOD3O60568 738 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 E2F6O75461 281 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 GNAO1P09471 354 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 RNH1P13489 461 aaKnown RBP17.58■□□□□ 0.4
POLR1E-203ENST00000442009 FPR1P21462 350 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 PRKACGP22612 351 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 MYF6P23409 242 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 CNR2P34972 360 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 OR1E2P47887 323 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 KCNJ5P48544 419 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 KCNAB1Q14722 419 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 PRICKLE4Q2TBC4 344 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 AMZ1Q400G9 498 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 HEPHL1Q6MZM0 1159 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 MFSD12Q6NUT3 480 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 TMEM154Q6P9G4 183 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 Q8N9G6 341 aaPredicted RBP17.58■□□□□ 0.4
POLR1E-203ENST00000442009 FAM181AQ8N9Y4 354 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 CCDC74AQ96AQ1 378 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 SDCCAG3Q96C92 435 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 ZNF347Q96SE7 839 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 PCDHGB3Q9Y5G1 929 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 CLDN16Q9Y5I7 305 aa17.58■□□□□ 0.4
POLR1E-203ENST00000442009 FRYLO94915 3013 aa17.57■□□□□ 0.4
POLR1E-203ENST00000442009 TMEM247A6NEH6 219 aa17.57■□□□□ 0.4
POLR1E-203ENST00000442009 CHRM4P08173 479 aa17.57■□□□□ 0.4
POLR1E-203ENST00000442009 SLC35E2P0CK97 266 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms