RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 POU4F3Q15319 338 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 RAB30Q15771 203 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 GCNT6Q5T4J0 391 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ATXN7L2Q5T6C5 722 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 QSOX2Q6ZRP7 698 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 TIGD4Q8IY51 512 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 CBARPQ8N350 705 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 OR4A15Q8NGL6 344 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 OR8J1Q8NGP2 316 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 CDC26Q8NHZ8 85 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 TM9SF4Q92544 642 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 MRPS31Q92665 395 aaKnown RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 UCN3Q969E3 161 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 C1GALT1C1Q96EU7 318 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ZNF578Q96N58 590 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 TM6SF2Q9BZW4 377 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 PPA2Q9H2U2 334 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 CUEDC1Q9NWM3 386 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 GSTK1Q9Y2Q3 226 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 SF3B6Q9Y3B4 125 aaKnown RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 SPIN1Q9Y657 262 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 USP34Q70CQ2 3546 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 A0A0A6YYJ9 748 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 PRAMEF33A0A0G2JMD5 474 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 SMIM30A4D0T7 59 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 SLC30A4O14863 429 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 SMAD6O43541 496 aaKnown RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 PRAMEF10O60809 474 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 C8GP07360 202 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 DDCP20711 480 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 WEE1P30291 646 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 CSKP41240 450 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 HNMTP50135 292 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 RPS25P62851 125 aaKnown RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 ALDH6A1Q02252 535 aaKnown RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 TEAD2Q15562 447 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 ZXDCQ2QGD7 858 aaPredicted RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 CYP27C1Q4G0S4 372 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 CRB2Q5IJ48 1285 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 COX20Q5RI15 118 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 TYW3Q6IPR3 259 aaKnown RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 CASP12Q6UXS9 341 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 TMIGD1Q6UXZ0 262 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 C16orf62Q7Z3J2 963 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 CAMKMTQ7Z624 323 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 ADGRD2Q7Z7M1 963 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 GPAT4Q86UL3 456 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 ADGRG3Q86Y34 549 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 CMTM8Q8IZV2 173 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 TAGAPQ8N103 731 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 NXPE1Q8N323 547 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 RNF175Q8N4F7 328 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 NFKBIDQ8NI38 313 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.28□□□□□ -0.64e-6■■□□□ 13.7
LTBR-203ENST00000441074 PHF21AQ96BD5 680 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 TIFAQ96CG3 184 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 METTL2AQ96IZ6 378 aaKnown RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 LINC00597Q9H2U6 94 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 ISYNA1Q9NPH2 558 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 IL26Q9NPH9 171 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 GPATCH2Q9NW75 528 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 VPS29Q9UBQ0 182 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 DNMT3AQ9Y6K1 912 aaPredicted RBP11.28□□□□□ -0.6
LTBR-203ENST00000441074 SCN8AQ9UQD0 1980 aa11.28□□□□□ -0.6
LTBR-203ENST00000441074 HEPACAM2A8MVW5 462 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 BNIP3LO60238 219 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 PRAMEF4O60810 478 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 SOCS5O75159 536 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 SERPINI2O75830 405 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 RAB36O95755 333 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 LATS1O95835 1130 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 HOXD4P09016 255 aaPredicted RBP11.27□□□□□ -0.6
LTBR-203ENST00000441074 RRASP10301 218 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 JUPP14923 745 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 AOAHP28039 575 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 SLC6A1P30531 599 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 FGF9P31371 208 aaPredicted RBP11.27□□□□□ -0.6
LTBR-203ENST00000441074 FEN1P39748 380 aaKnown RBP11.27□□□□□ -0.6
LTBR-203ENST00000441074 ETV5P41161 510 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 NSG1P42857 185 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 ASMTP46597 345 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 SLC6A12P48065 614 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 ETV1P50549 477 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 DGKEP52429 567 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 LRRC74AQ0VAA2 488 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 TPBGQ13641 420 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 HEPACAMQ14CZ8 416 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 ZNF284Q2VY69 593 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 ATAT1Q5SQI0 421 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 GARNL3Q5VVW2 1013 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 PRAMEF9Q5VWM5 478 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 ZNF57Q68EA5 555 aaPredicted RBP11.27□□□□□ -0.6
LTBR-203ENST00000441074 CEACAM20Q6UY09 585 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 Q6ZNB5 142 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 GRASPQ7Z6J2 395 aaPredicted RBP11.27□□□□□ -0.6
LTBR-203ENST00000441074 DCAF4L2Q8NA75 395 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms