RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 POLDIP3Q9BY77 421 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 POLR2J2Q9GZM3 115 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 SRRQ9GZT4 340 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 S1PR5Q9H228 398 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 TP63Q9H3D4 680 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 SNTG1Q9NSN8 517 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 OBP2AQ9NY56 170 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 MUTYHQ9UIF7 546 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ZNF221Q9UK13 617 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 A4GNTQ9UNA3 340 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 DIMT1Q9UNQ2 313 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 GPR34Q9UPC5 381 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ASF1AQ9Y294 204 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 MYL12BO14950 172 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 RGS5O15539 181 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 KRT8P05787 483 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC6A11P48066 632 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 COPZ1P61923 177 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 TARDBPQ13148 414 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 C1DQ13901 141 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 SPDYE7PQ495Y7 208 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC25A30Q5SVS4 291 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 NXNL2Q5VZ03 156 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 PAQR6Q6TCH4 344 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 CD300LDQ6UXZ3 194 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 BCDIN3DQ7Z5W3 292 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 C17orf64Q86WR6 236 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 DCUN1D3Q8IWE4 304 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 ETFBKMTQ8IXQ9 262 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 FAM26EQ8N5C1 309 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 C2orf73Q8N5S3 287 aaPredicted RBP15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 OR9Q1Q8NGQ5 310 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 ARRDC3Q96B67 414 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 ACAT2Q9BWD1 397 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 LHX9Q9NQ69 397 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 CLDND1Q9NY35 253 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 SEC14L3Q9UDX4 400 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 HCN2Q9UL51 889 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 SSR3Q9UNL2 185 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 CMAHPQ9Y471 501 aa15.5■□□□□ 0.07
CLCNKA-203ENST00000439316 PRAMEF27A3QJZ7 478 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 WWP2O00308 870 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 PRKYO43930 277 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 PRNPP04156 253 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 C6P13671 934 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 GSTM5P46439 218 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 DPTQ07507 201 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 LARS2Q15031 903 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 GAB4Q2WGN9 574 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 ZMAT1Q5H9K5 638 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 ATAD3CQ5T2N8 411 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 MMAAQ8IVH4 418 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 IQCF1Q8N6M8 205 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 TP53INP1Q96A56 240 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 NEDD4LQ96PU5 975 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 TREX2Q9BQ50 279 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 AIF1LQ9BQI0 150 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 PLA2G2FQ9BZM2 168 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 MVB12BQ9H7P6 319 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 WASH6PQ9NQA3 447 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 C5AR2Q9P296 337 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 ZNF232Q9UNY5 417 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 A0A1W2PRQ8 180 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 FAM47E-STBD1D6RA91 191 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC28A2O43868 658 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 VEGFDO43915 354 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 SH3BP5O60239 455 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 NME6O75414 186 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 CYP7B1O75881 506 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 REEP5Q00765 189 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 RUNX1T1Q06455 604 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 BAK1Q16611 211 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 PODNL1Q6PEZ8 512 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 ZNF517Q6ZMY9 492 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 COMTD1Q86VU5 262 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 TBC1D19Q8N5T2 526 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 OR52I1Q8NGK6 324 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 FGF11Q92914 225 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC25A46Q96AG3 418 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 EXOSC8Q96B26 276 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 ZBED6CLQ96FA7 236 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 QRFPRQ96P65 431 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 KXD1Q9BQD3 176 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 OR2B2Q9GZK3 357 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 PRO3102Q9H379 93 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 ACSS1Q9NUB1 689 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 CUEDC1Q9NWM3 386 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 TVP23BQ9NYZ1 205 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 P2RX2Q9UBL9 471 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 TESQ9UGI8 421 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 TAC3Q9UHF0 121 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC27A6Q9Y2P4 619 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 PCYT1BQ9Y5K3 369 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 NINQ8N4C6 2090 aa15.49■□□□□ 0.07
CLCNKA-203ENST00000439316 TMPRSS11DO60235 418 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 RAB36O95755 333 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 LGI1O95970 557 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 IL1AP01583 271 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 IL7P13232 177 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 TNNI3P19429 210 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms