RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TRBC1P01850 177 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 MT-ND4P03905 459 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 HNRNPCL4P0DMR1 293 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 HAAOP46952 286 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 XKP51811 444 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 SEMG2Q02383 582 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ACVR1Q04771 509 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 EFEMP1Q12805 493 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 MELKQ14680 651 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CEACAM20Q6UY09 585 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 HMGN2P46Q86SG4 172 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 C3orf58Q8NDZ4 430 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 KIAA1143Q96AT1 154 aaPredicted RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 GMLQ99445 158 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 MAPKAP1Q9BPZ7 522 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 PAAF1Q9BRP4 392 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ATG10Q9H0Y0 220 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ARL15Q9NXU5 204 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ACTR10Q9NZ32 417 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CKAP5Q14008 2032 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 HEPACAM2A8MVW5 462 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 TMEM229AB2RXF0 380 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 CA12O43570 354 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 PCDH8O95206 1070 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 LGI1O95970 557 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 EGFP01133 1207 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 ODC1P11926 461 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 TTPAP49638 278 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 BAMBIQ13145 260 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 PLA1AQ53H76 456 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 PLEKHH3Q7Z736 793 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 ZFP82Q8N141 532 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF687Q8N1G0 1237 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 CHCHD4Q8N4Q1 142 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 CHST13Q8NET6 341 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 OR52I1Q8NGK6 324 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 SPACA7Q96KW9 195 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF436Q9C0F3 470 aaPredicted RBP7.09□□□□□ -1.28
CPSF6-202ENST00000435070 POLR2J3Q9H1A7 115 aaKnown RBP7.09□□□□□ -1.28
CPSF6-202ENST00000435070 RRAGCQ9HB90 399 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 RC3H2Q9HBD1 1191 aaKnown RBP7.09□□□□□ -1.28
CPSF6-202ENST00000435070 FTSJ1Q9UET6 329 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 SPACA6W5XKT8 324 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 SIP14410 1827 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 SBF1O95248 1867 aa7.09□□□□□ -1.28
CPSF6-202ENST00000435070 CCDC85CA6NKD9 419 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 HHLA1C9JL84 531 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 NDUFS6O75380 124 aaKnown RBP7.08□□□□□ -1.28
CPSF6-202ENST00000435070 PRPS2P11908 318 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 CTPS1P17812 591 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 MAOBP27338 520 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 MPEG1Q2M385 716 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 FAM151BQ6UXP7 276 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 IKBIPQ70UQ0 350 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 TRIM46Q7Z4K8 759 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 COMMD2Q86X83 199 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF454Q8N9F8 522 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 RELL2Q8NC24 303 aaPredicted RBP7.08□□□□□ -1.28
CPSF6-202ENST00000435070 SCMH1Q96GD3 660 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 NT5DC2Q9H857 520 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 NLE1Q9NVX2 485 aaPredicted RBP7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.08□□□□□ -1.28
CPSF6-202ENST00000435070 A0A0D9SEW6 157 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 TRBC2A0A5B9 178 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 MFSD2BA6NFX1 497 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 MID1O15344 667 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 LALBAP00709 142 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 HPGDP15428 266 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 RAB3BP20337 219 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 LPOP22079 712 aaPredicted RBP7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ALDH9A1P49189 494 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 CDC42EP1Q00587 391 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF177Q13360 481 aaPredicted RBP7.08□□□□□ -1.28
CPSF6-202ENST00000435070 RGNQ15493 299 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 OR4C15Q8NGM1 316 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 KCNJ15Q99712 375 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 DUSP26Q9BV47 211 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 TMEM168Q9H0V1 697 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 PCDHB11Q9Y5F2 797 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 A0A1W2PQH9 124 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 RAB19A4D1S5 217 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ANXA2P2A6NMY6 339 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 PRKYO43930 277 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 NMBP08949 121 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 IGFBP4P22692 258 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 BTG1P62324 171 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF791Q3KP31 576 aaPredicted RBP7.08□□□□□ -1.28
CPSF6-202ENST00000435070 PLK5Q496M5 336 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ALKBH2Q6NS38 261 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ESPNLQ6ZVH7 1005 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 CCDC36Q8IYA8 594 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 HSD17B8Q92506 261 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 KCNJ9Q92806 393 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 CCDC3Q9BQI4 270 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 ZYG11BQ9C0D3 744 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 OSGEPL1Q9H4B0 414 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 EXO5Q9H790 373 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 FLRT1Q9NZU1 646 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 NDOR1Q9UHB4 597 aa7.08□□□□□ -1.28
CPSF6-202ENST00000435070 KRBOX1C9JBD0 128 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms