RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 NUDT1P36639 197 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 BUD31P41223 144 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 ST13P50502 369 aaKnown RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 CCR5P51681 352 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 CDC42P60953 191 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 BTN3A2P78410 334 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 ILF3Q12906 894 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDX56-204ENST00000431640 NFATC3Q12968 1075 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SUZ12Q15022 739 aaKnown RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 MAPK11Q15759 364 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 RPS26P11Q5JNZ5 115 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 DCST1Q5T197 706 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 KIAA0895LQ68EN5 471 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 TRIM48Q8IWZ4 208 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 CCDC116Q8IYX3 515 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 NR4A3Q92570 626 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SGCDQ92629 289 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 UCN3Q969E3 161 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 TM4SF19Q96DZ7 209 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 COL21A1Q96P44 957 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SERINC2Q96SA4 455 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 TREX2Q9BQ50 279 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 DCUN1D5Q9BTE7 237 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 FUNDC2Q9BWH2 189 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 DGCR6LQ9BY27 220 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 NAA50Q9GZZ1 169 aaKnown RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 TMEM168Q9H0V1 697 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 RASSF1Q9NS23 344 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 CALML5Q9NZT1 146 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 PHF11Q9UIL8 331 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 ENPP5Q9UJA9 477 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 LIPT1Q9Y234 373 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SLC9A8Q9Y2E8 581 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 A0A1W2PPW3 197 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 OR2A25A4D2G3 310 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 FAAHO00519 579 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SCAMP1O15126 338 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 ASNA1O43681 348 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 ZNF217O75362 1048 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 INMTO95050 263 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SLC34A2O95436 690 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 EML2O95834 649 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 VIPP01282 170 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 H1F0P07305 194 aaKnown RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 CERS1P27544 350 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 HOXA6P31267 233 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 TLX1P31314 330 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 RAB8AP61006 207 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 GANABQ14697 944 aaKnown RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 SYPL1Q16563 259 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 ALG11Q2TAA5 492 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 CYP27C1Q4G0S4 372 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 PRRT3Q5FWE3 981 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 MANEAQ5SRI9 462 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 FBXO42Q6P3S6 717 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 Q6ZSR6 202 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SZRD1Q7Z422 152 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 CCDC71Q8IV32 467 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 C1orf210Q8IVY1 113 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 DTWD2Q8NBA8 298 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 CAMKVQ8NCB2 501 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 GPR32P1Q8NGA4 272 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 FAM81AQ8TBF8 368 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 FAM174AQ8TBP5 190 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 GAB3Q8WWW8 586 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 FKBP10Q96AY3 582 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 CNRIP1Q96F85 164 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 DHRS1Q96LJ7 313 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 NIPSNAP1Q9BPW8 284 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 MACROD1Q9BQ69 325 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 COL25A1Q9BXS0 654 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 GSDMCQ9BYG8 508 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 TRIM45Q9H8W5 580 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 NMNAT1Q9HAN9 279 aaPredicted RBP12.09□□□□□ -0.47
DDX56-204ENST00000431640 RLIMQ9NVW2 624 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 IMPAD1Q9NX62 359 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 MS4A12Q9NXJ0 267 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 KLK4Q9Y5K2 254 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 SNX11Q9Y5W9 270 aa12.09□□□□□ -0.47
DDX56-204ENST00000431640 LAMA1P25391 3075 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 SH3D21A4FU49 640 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 GLOD5A6NK44 160 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 DUXAA6NLW8 204 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 CASC3O15234 703 aaKnown RBP12.08□□□□□ -0.48
DDX56-204ENST00000431640 RECKO95980 971 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 AGR2O95994 175 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 GASTP01350 101 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 SMIM10L1P0DMW3 83 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 NR2F6P10588 404 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 ACVR2AP27037 513 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 KRT20P35900 424 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 CRISP1P54107 249 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 PRKAG1P54619 331 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 GP2P55259 537 aaKnown RBP12.08□□□□□ -0.48
DDX56-204ENST00000431640 LIM2P55344 173 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 MOGQ16653 247 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 FGD3Q5JSP0 725 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 TCTN3Q6NUS6 607 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 FIGLAQ6QHK4 219 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 VN1R4Q7Z5H5 301 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms