RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RORAP35398 523 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 MVDP53602 400 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 GABREP78334 506 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 ROR2Q01974 943 aaKnown RBP8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZNF33BQ06732 778 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 STX4Q12846 297 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 LRRC36Q1X8D7 754 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 FAM214AQ32MH5 1076 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZFP1Q6P2D0 407 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 BNC2Q6ZN30 1099 aaPredicted RBP8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 SRFBP1Q8NEF9 429 aaKnown RBP8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR4K14Q8NGD5 310 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZG16BQ96DA0 208 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 THAP11Q96EK4 314 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR8D2Q9GZM6 311 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 TPT1P8Q9HAU6 139 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZCCHC3Q9NUD5 404 aaKnown RBP8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 SIRT5Q9NXA8 310 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 IL17BQ9UHF5 180 aa8.9□□□□□ -0.98
HMGCLL1-206ENST00000428842 SVILO95425 2214 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 TRBV5-3A0A0A0MS03 114 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 NPIPA5A0A0B4J1W7 369 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 IDSB3KWA1 339 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 NPIPA7E9PJI5 369 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 SEC24DO94855 1032 aaPredicted RBP8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 HMGN2P05204 90 aaKnown RBP8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 NPIPA8P0DM63 369 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 CPMP14384 443 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 TNFRSF1BP20333 461 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 RAB38P57729 211 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 MC2RQ01718 297 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 RELAQ04206 551 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 LIPEQ05469 1076 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 SRSF11Q05519 484 aaKnown RBP8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF267Q14586 743 aaPredicted RBP8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 NKG7Q16617 165 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPDYE7PQ495Y7 208 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 LIN52Q52LA3 116 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 C8orf82Q6P1X6 216 aaPredicted RBP8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 UGT2A3Q6UWM9 527 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 HORMAD2Q8N7B1 307 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC16A11Q8NCK7 471 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 PIK3R3Q92569 461 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF583Q96ND8 569 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 PRTFDC1Q9NRG1 225 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 TAS2R9Q9NYW1 312 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 RIMS3Q9UJD0 308 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 ADAM29Q9UKF5 820 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 ERVK-19Q9WJR5 959 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 AK5Q9Y6K8 562 aa8.9□□□□□ -0.99
HMGCLL1-206ENST00000428842 PTPRQQ9UMZ3 2332 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CENPVL1A0A0U1RR11 272 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 TOX3O15405 576 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 DENRO43583 198 aaKnown RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 F10P00742 488 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 FGF5P12034 268 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 TCN2P20062 427 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC5A2P31639 672 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CCKBRP32239 447 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CHI3L1P36222 383 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CCT3P49368 545 aaKnown RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 GSK3BP49841 420 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 TGM3Q08188 693 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 RAPSNQ13702 412 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 DSG2Q14126 1118 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ADRM1Q16186 407 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 NDUFA9Q16795 377 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 DCAF12Q5T6F0 453 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 FCRLBQ6BAA4 426 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 KMT5CQ86Y97 462 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPPL2CQ8IUH8 684 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 PRR22Q8IZ63 422 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ST13P4Q8IZP2 240 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 MARVELD2Q8N4S9 558 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC9A6Q92581 669 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ITCHQ96J02 903 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPSB2Q99619 263 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 FAIM2Q9BWQ8 316 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 BCAP29Q9UHQ4 241 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 DTNAQ9Y4J8 743 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF780BQ9Y6R6 833 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ADGRG4Q8IZF6 3080 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CLDN24A6NM45 220 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 OR10H2O60403 315 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 KLF7O75840 302 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 GPR75O95800 540 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ATP6V1B2P21281 511 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ME2P23368 584 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CLCN2P51788 898 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 DCDP81605 110 aaKnown RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 RHAGQ02094 409 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 EEF1A2Q05639 463 aaKnown RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 PPP1R8Q12972 351 aaKnown RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 PDK3Q15120 406 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SYPL1Q16563 259 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SMU1Q2TAY7 513 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 C11orf91Q3C1V1 193 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 RUNDC3AQ59EK9 446 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 C10orf62Q5T681 223 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 C6orf120Q7Z4R8 191 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms