RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 UNC5DQ6UXZ4 953 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 TRMT11Q7Z4G4 463 aaKnown RBP15.27■□□□□ 0.03
C9orf3-206ENST00000428313 OAFQ86UD1 273 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 MARCH9Q86YJ5 346 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 RPLP0P6Q8NHW5 317 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 HUS1BQ8NHY5 278 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 FAM126AQ9BYI3 521 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-206ENST00000428313 LATS2Q9NRM7 1088 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 MRPS18AQ9NVS2 196 aaKnown RBP15.27■□□□□ 0.03
C9orf3-206ENST00000428313 EDARQ9UNE0 448 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 PCDHB7Q9Y5E2 793 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 SMIM28A0A1B0GU29 152 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ANXA2P2A6NMY6 339 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PRRG1O14668 218 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PRAF2O60831 178 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 SDC3O75056 442 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 GUCA1CO95843 209 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 OPN1SWP03999 348 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF865P0CJ78 1059 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 SMIM6P0DI80 62 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 TYRP14679 529 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 NFYAP23511 347 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 GIFP27352 417 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF280AP59817 542 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 TAP2Q03519 686 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PLD1Q13393 1074 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 BOP1Q14137 746 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PUM1Q14671 1186 aaKnown RBP eCLIP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF528Q3MIS6 628 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 WSCD1Q658N2 575 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PYHIN1Q6K0P9 492 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PSAPL1Q6NUJ1 521 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PIANPQ8IYJ0 282 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 CLECL1Q8IZS7 167 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 TCEANCQ8N8B7 351 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 GPR26Q8NDV2 337 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ZDHHC1Q8WTX9 485 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 SELENOMQ8WWX9 145 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 KCTD12Q96CX2 325 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 NMUR1Q9HB89 426 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 MBD2Q9UBB5 411 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 BTNL2Q9UIR0 455 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 HS3ST4Q9Y661 456 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 DOCK4Q8N1I0 1966 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 MCRIP1C9JLW8 97 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 GLAP06280 429 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 BTF3P20290 206 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 CHI3L1P36222 383 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 FEN1P39748 380 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 GDF5P43026 501 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PTGER3P43115 390 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 GDI2P50395 445 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PTPN5P54829 565 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 HLXQ14774 488 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 OTOP2Q7RTS6 562 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 MRPL10Q7Z7H8 261 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 SLITRK4Q8IW52 837 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF687Q8N1G0 1237 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 STK40Q8N2I9 435 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 WDR20Q8TBZ3 569 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 CNOT9Q92600 299 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 PSMG2Q969U7 264 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 SMARCD1Q96GM5 515 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 EGFL8Q99944 293 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF251Q9BRH9 671 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 ARHGAP9Q9BRR9 750 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 POLDIP3Q9BY77 421 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 KCND3Q9UK17 655 aa15.26■□□□□ 0.03
C9orf3-206ENST00000428313 EXOSC1Q9Y3B2 195 aaKnown RBP15.26■□□□□ 0.03
C9orf3-206ENST00000428313 BRWD3Q6RI45 1802 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 TP53BP1Q12888 1972 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-206ENST00000428313 SHISA3A0PJX4 238 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 GIPP09681 153 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-206ENST00000428313 COX7A2P14406 83 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 KCNE1P15382 129 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 AMD1P17707 334 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 GALP22466 123 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-206ENST00000428313 XKP51811 444 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 GAS1P54826 345 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 PRMT2P55345 433 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 GGTA1PQ4G0N0 100 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 FAM26DQ5JW98 314 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 OR2G6Q5TZ20 316 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 ALKAL2Q6UX46 152 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 GPR135Q8IZ08 494 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 TOMM5Q8N4H5 51 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 SPICQ8N5J4 248 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 GATAD2BQ8WXI9 593 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 PCED1BQ96HM7 432 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 ERVK-19Q9WJR5 959 aa15.25■□□□□ 0.03
C9orf3-206ENST00000428313 MRPL42Q9Y6G3 142 aaKnown RBP15.25■□□□□ 0.03
C9orf3-206ENST00000428313 TRABD2BA6NFA1 517 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 POM121CA8CG34 1229 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 GABRPO00591 440 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 KDM4BO94953 1096 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SOX30O94993 753 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 HPP00738 406 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 TFP02787 698 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 PPP3CBP16298 524 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms