RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TCEANCQ8N8B7 351 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 EIF1ADQ8N9N8 165 aaKnown RBP4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 MLKLQ8NB16 471 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 SLC16A11Q8NCK7 471 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 OR13C2Q8NGS9 318 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 SENP8Q96LD8 212 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 DEFB118Q96PH6 123 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 DUX5Q96PT3 197 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 VPS35Q96QK1 796 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 ZBTB18Q99592 522 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 NMRK1Q9NWW6 199 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 SELENOKQ9Y6D0 94 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 C3P01024 1663 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 KIF1AQ12756 1690 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 TTC21AQ8NDW8 1320 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 KIAA0754O94854 1291 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 PAK4O96013 591 aaPredicted RBP4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 PRKAR1AP10644 381 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 OR3A2P47893 321 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 UBE2HP62256 183 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 P2RY6Q15077 328 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 C3AR1Q16581 482 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 ATP1A1-AS1Q5TC04 95 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 TRIM65Q6PJ69 517 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 DBX2Q6ZNG2 339 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 NAGSQ8N159 534 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 RDH11Q8TC12 318 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 SUSD6Q92537 303 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 DYRK2Q92630 601 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 TMEM143Q96AN5 459 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 C4orf36Q96KX1 117 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 DCTN5Q9BTE1 182 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 ALG12Q9BV10 488 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 TDRD1Q9BXT4 1180 aaKnown RBP4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 RPAP3Q9H6T3 665 aaPredicted RBP4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 VPS37BQ9H9H4 285 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 RDH8Q9NYR8 311 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 POMT2Q9UKY4 750 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 FAF1Q9UNN5 650 aaPredicted RBP4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 B9D1Q9UPM9 204 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 WIPI2Q9Y4P8 454 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 ADGRL3Q9HAR2 1447 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 NCOA3Q9Y6Q9 1424 aa4.04□□□□□ -1.76
NUDCD1-202ENST00000427660 XRN1Q8IZH2 1706 aaKnown RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 MBLAC1A4D2B0 266 aaPredicted RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 SLC1A7O00341 560 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ZBTB11O95625 1053 aaPredicted RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 GPIP06744 558 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 SLC2A2P11168 524 aaPredicted RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 CHI3L1P36222 383 aaPredicted RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 MATKP42679 507 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 HERVK_113P63132 956 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ERVK-8P63133 956 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 TRIP10Q15642 601 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 CLPPQ16740 277 aaPredicted RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 FAM106AQ4KMX7 169 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 NIPA2Q8N8Q9 360 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ADAD2Q8NCV1 583 aaKnown RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 OR56B2PQ8NGI1 322 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 GPR148Q8TDV2 347 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 RNF139Q8WU17 664 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ZNRF4Q8WWF5 429 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 HPSE2Q8WWQ2 592 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 FCAMRQ8WWV6 532 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 IGSF21Q96ID5 467 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ACCSQ96QU6 501 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 RAB40CQ96S21 281 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 NKX3-1Q99801 234 aaPredicted RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ERVK-6Q9BXR3 956 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 FNDC4Q9H6D8 234 aaPredicted RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 DDX31Q9H8H2 851 aaKnown RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 GDF3Q9NR23 364 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 CHRNA9Q9UGM1 479 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ZNF175Q9Y473 711 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 NRXN3Q9Y4C0 1643 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 FAM208AQ9UK61 1670 aaKnown RBP4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 TTC21BQ7Z4L5 1316 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 ZNF521Q96K83 1311 aa4.03□□□□□ -1.76
NUDCD1-202ENST00000427660 TCP10L2B9ZVM9 353 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 C16orf97H3BN30 126 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 RPL35AP18077 110 aaKnown RBP4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 FEN1P39748 380 aaKnown RBP4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 PPIAP62937 165 aaKnown RBP4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 CDR2Q01850 454 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 DDX39BQ13838 428 aaKnown RBP4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 PDK3Q15120 406 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 CCDC57Q2TAC2 916 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 ZYG11AQ6WRX3 759 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 ASRGL1Q7L266 308 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 LHFPL4Q7Z7J7 247 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 CNBD1Q8NA66 436 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 ZNF397Q8NF99 534 aaPredicted RBP4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 OR52K2Q8NGK3 314 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 SLC25A36Q96CQ1 311 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 OMA1Q96E52 524 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 PCED1BQ96HM7 432 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 INPP4AQ96PE3 977 aaPredicted RBP4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 PSKH2Q96QS6 385 aa4.02□□□□□ -1.77
NUDCD1-202ENST00000427660 TMEM204Q9BSN7 226 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms