RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 DEPDC1Q5TB30 811 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 SCIMPQ6UWF3 145 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 PLXDC2Q6UX71 529 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 ANGPTL8Q6UXH0 198 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 PRR22Q8IZ63 422 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 OR14L1PQ8NHC6 308 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 WNT2BQ93097 391 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 UCN3Q969E3 161 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 WFIKKN1Q96NZ8 548 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 FAM111AQ96PZ2 611 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 DERL2Q9GZP9 239 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 METTL7AQ9H8H3 244 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 PLAC1Q9HBJ0 212 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 KLHL28Q9NXS3 571 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 FETUBQ9UGM5 382 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 PACSIN3Q9UKS6 424 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 PSAT1Q9Y617 370 aa13.35□□□□□ -0.27
PDAP1-202ENST00000426447 GOLGA6L10A0A0M3HER8 536 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 SMNDC1O75940 238 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDAP1-202ENST00000426447 PTPN6P29350 595 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 SERPINB1P30740 379 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 SOX18P35713 384 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 MC3RP41968 323 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 RPS13P62277 151 aaKnown RBP13.34□□□□□ -0.27
PDAP1-202ENST00000426447 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 MGAT5Q09328 741 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 CDKL4Q5MAI5 379 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 OR7G3Q8NG95 312 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 RDH11Q8TC12 318 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 MED18Q9BUE0 208 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 WDR41Q9HAD4 459 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 POPDC3Q9HBV1 291 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 NINQ8N4C6 2090 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 KIAA1549Q9HCM3 1950 aa13.34□□□□□ -0.27
PDAP1-202ENST00000426447 CSPG4Q6UVK1 2322 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 C2orf72A6NCS6 295 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 RNF212BA8MTL3 300 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 DEFB108AA8MXU0 73 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 PGRMC1O00264 195 aaKnown RBP13.33□□□□□ -0.28
PDAP1-202ENST00000426447 CRLF1O75462 422 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 CLPSP04118 112 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 SLC35E2BP0CK96 405 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 SLC35E2P0CK97 266 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 CCDC166P0CW27 439 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 EPB42P16452 691 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 CHMP24386 653 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 GALNSP34059 522 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 FNTAP49354 379 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
PDAP1-202ENST00000426447 C6orf163Q5TEZ5 329 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 CYP20A1Q6UW02 462 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 ZNF662Q6ZS27 426 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 P4HA3Q7Z4N8 544 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 GRAMD2AQ8IUY3 354 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 TRIM42Q8IWZ5 723 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 LAS2Q8IYD9 372 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 ZCCHC7Q8N3Z6 543 aaKnown RBP13.33□□□□□ -0.28
PDAP1-202ENST00000426447 EXT2Q93063 718 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 CD244Q9BZW8 370 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 OR10A5Q9H207 317 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 ADGRE2Q9UHX3 823 aa13.33□□□□□ -0.28
PDAP1-202ENST00000426447 PTBP2Q9UKA9 531 aaKnown RBP13.33□□□□□ -0.28
PDAP1-202ENST00000426447 HIVEP2P31629 2446 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 PLPP1O14494 284 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 MSTNO14793 375 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 CBR3O75828 277 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 NR2F6P10588 404 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 EPORP19235 508 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 CDC25BP30305 580 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 STARP49675 285 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 STEAP4Q687X5 459 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 SLC30A6Q6NXT4 461 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 CHMP1BQ7LBR1 199 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
PDAP1-202ENST00000426447 ANKMY2Q8IV38 441 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 GALNT12Q8IXK2 581 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 RNF175Q8N4F7 328 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 CNEP1R1Q8N9A8 125 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 LRRC39Q96DD0 335 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 UCN2Q96RP3 112 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 ACTR8Q9H981 624 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 CXorf21Q9HAI6 301 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 SERHLQ9NQF3 203 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 LYARQ9NX58 379 aaKnown RBP13.32□□□□□ -0.28
PDAP1-202ENST00000426447 NSMCE4AQ9NXX6 385 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 RNF112Q9ULX5 631 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 MAPRE3Q9UPY8 281 aa13.32□□□□□ -0.28
PDAP1-202ENST00000426447 RTTNQ86VV8 2226 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 A0A1W2PR48 441 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 SIAH2O43255 324 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 ICOSLGO75144 302 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 ABCB1P08183 1280 aaPredicted RBP13.31□□□□□ -0.28
PDAP1-202ENST00000426447 FAM58BPP0C7Q3 252 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 CRYGSP22914 178 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 PIK3R1P27986 724 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 ABCD3P28288 659 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 CD79BP40259 229 aa13.31□□□□□ -0.28
PDAP1-202ENST00000426447 KCNJ5P48544 419 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms