RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 CIDECQ96AQ7 238 aaPredicted RBP23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 AMDHD1Q96NU7 426 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 OR52B2Q96RD2 323 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 GAL3ST4Q96RP7 486 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 NPAS2Q99743 824 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 UTP23Q9BRU9 249 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 RNF32Q9H0A6 362 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 GLIPR2Q9H4G4 154 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 MYOTQ9UBF9 498 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 ATRXP46100 2492 aa23.59■■□□□ 1.37
TSPAN3-203ENST00000424443 ITGA10O75578 1167 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 BCAS2O75934 225 aaPredicted RBP23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 SLITRK5O94991 958 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 F10P00742 488 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 VIMP08670 466 aaKnown RBP23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 GPC1P35052 558 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 OC90Q02509 493 aaPredicted RBP23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 MGAT2Q10469 447 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 TRMT12Q53H54 448 aaKnown RBP23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 ZNF628Q5EBL2 1059 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 C9orf40Q8IXQ3 194 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 TMEM156Q8N614 296 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 NUBPLQ8TB37 319 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 ERP27Q96DN0 273 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 LIN28AQ9H9Z2 209 aaKnown RBP23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 TCF7L2Q9NQB0 619 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 AIG1Q9NVV5 245 aa23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 YARS2Q9Y2Z4 477 aaKnown RBP23.58■■□□□ 1.36
TSPAN3-203ENST00000424443 OR5H15A6NDH6 313 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 WWP2O00308 870 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 CDK2AP1O14519 115 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 UBDO15205 165 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 MAN1A2O60476 641 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 PRAMEF2O60811 474 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 ALDOCP09972 364 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 IDO1P14902 403 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 CLNS1AP54105 237 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 HSPB3Q12988 150 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 EXOSC7Q15024 291 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 PGS1Q32NB8 556 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 LSM12Q3MHD2 195 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 RIMKLAQ8IXN7 391 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 ARMC10Q8N2F6 343 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 RBMXL3Q8N7X1 1067 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 CTHRC1Q96CG8 243 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 CPAMD8Q8IZJ3 1885 aa23.57■■□□□ 1.36
TSPAN3-203ENST00000424443 C2orf92A0A1B0GVN3 265 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 OR2J2O76002 312 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 PRB1P04280 392 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 CD97P48960 835 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 IDH3AP50213 366 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 SSR4P51571 173 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 C21orf58P58505 322 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 HORMAD2Q8N7B1 307 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 ZNF615Q8N8J6 731 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 OR52R1Q8NGF1 315 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 THOC1Q96FV9 657 aaKnown RBP23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 SIKE1Q9BRV8 207 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 DUSP26Q9BV47 211 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 BHLHE41Q9C0J9 482 aaPredicted RBP23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 WWTR1Q9GZV5 400 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 NPHS2Q9NP85 383 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 SLAMF7Q9NQ25 335 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 ACSS1Q9NUB1 689 aaPredicted RBP23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 ANKRD10Q9NXR5 420 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 PRODH2Q9UF12 536 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 ZNF639Q9UID6 485 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 B3GNT3Q9Y2A9 372 aa23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 HEMK1Q9Y5R4 338 aaPredicted RBP23.56■■□□□ 1.36
TSPAN3-203ENST00000424443 TROVE2P10155 538 aaKnown RBP eCLIP23.55■■□□□ 1.362e-6■□□□□ 9.2
TSPAN3-203ENST00000424443 LAMP1P11279 417 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 S1PR1P21453 382 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 NME5P56597 212 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 EBPQ15125 230 aaKnown RBP23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 TLR1Q15399 786 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 GSTA3Q16772 222 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 NADK2Q4G0N4 442 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 TMEM107Q6UX40 140 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 ZNF551Q7Z340 670 aaPredicted RBP23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 COQ8BQ96D53 544 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 ZBTB18Q99592 522 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 CCDC28BQ9BUN5 200 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 CCDC134Q9H6E4 229 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 ANAPC2Q9UJX6 822 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 TLN1Q9Y490 2541 aaKnown RBP23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 BOD1L1Q8NFC6 3051 aa23.55■■□□□ 1.36
TSPAN3-203ENST00000424443 A0A1W2PRB8 838 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 PLOD3O60568 738 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 CLPSP04118 112 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 CYB561P49447 251 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 ST13P50502 369 aaKnown RBP23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 SRSF11Q05519 484 aaKnown RBP23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 TUBA3CQ13748 450 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 MPEG1Q2M385 716 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 SLC6A19Q695T7 634 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 TUBA3EQ6PEY2 450 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 C16orf47Q6ZP98 133 aaPredicted RBP23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 C16orf52Q8NHV5 167 aa23.54■■□□□ 1.36
TSPAN3-203ENST00000424443 SLC22A8Q8TCC7 542 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms