RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CPN2P22792 545 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 TLX1P31314 330 aaPredicted RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 SOX18P35713 384 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 POLR2IP36954 125 aaKnown RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 FEN1P39748 380 aaKnown RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 MC3RP41968 323 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CAPZBP47756 277 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 OR1E2P47887 323 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CDH12P55289 794 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 NXPH1P58417 271 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ZP2Q05996 745 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 NPRL3Q12980 569 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CDK5R2Q13319 367 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 LASP1Q14847 261 aaKnown RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 SYPL1Q16563 259 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 MEP1AQ16819 746 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 EXOC3L2Q2M3D2 409 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF750Q32MQ0 723 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 INAVAQ3KP66 663 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF542PQ5EBM4 170 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 FHL5Q5TD97 284 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 AP1ARQ63HQ0 302 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF770Q6IQ21 691 aaPredicted RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CDC73Q6P1J9 531 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 KLHL35Q6PF15 583 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 TMEM107Q6UX40 140 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC36A4Q6YBV0 504 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 DGLUCYQ7Z3D6 616 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 GALNT5Q7Z7M9 940 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 KRT73Q86Y46 540 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CCDC116Q8IYX3 515 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CSNK1A1LQ8N752 337 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 C19orf47Q8N9M1 422 aaKnown RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ATG16L2Q8NAA4 619 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 SMYD1Q8NB12 490 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 FAM46DQ8NEK8 389 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 NUP43Q8NFH3 380 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 OR4K14Q8NGD5 310 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 OR5D16Q8NGK9 328 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 OR9A2Q8NGT5 310 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ZCCHC10Q8TBK6 192 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF675Q8TD23 568 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ZFAND2BQ8WV99 257 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 DNASE2BQ8WZ79 361 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 PROX1Q92786 737 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 HOXB13Q92826 284 aaPredicted RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 MS4A4EQ96PG1 132 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 TRNT1Q96Q11 434 aaKnown RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 OR7D2Q96RA2 312 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 SIGLEC11Q96RL6 698 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CSF3RQ99062 836 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 CDX2Q99626 313 aaPredicted RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 APOL4Q9BPW4 351 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 PINK1Q9BXM7 581 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ACTRT3Q9BYD9 372 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 RAB33BQ9H082 229 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC38A1Q9H2H9 487 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 RIBC2Q9H4K1 309 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 ENOPH1Q9UHY7 261 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 MRPS2Q9Y399 296 aaKnown RBP8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 HCN4Q9Y3Q4 1203 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 PCDHGB1Q9Y5G3 927 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 GMPPBQ9Y5P6 360 aa8.51□□□□□ -1.05
LINCMD1-201ENST00000418518 BLACEA4D250 179 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 C19orf67A6NJJ6 358 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 LMO7DNF2Z398 122 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 J3KTA2 159 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 KIF1CO43896 1103 aaKnown RBP8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 PLOD3O60568 738 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 SEMA7AO75326 666 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 GADD45GO95257 159 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 LGI1O95970 557 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 AGR2O95994 175 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 ADAP00813 363 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 ATP1B1P05026 303 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 C8orf89P0DMQ9 161 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 NR2F1P10589 423 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 ST6GAL1P15907 406 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 PORP16435 677 aaPredicted RBP8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 GGT2P36268 569 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 YAP1P46937 504 aaKnown RBP8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 GABRA4P48169 554 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 MAPK10P53779 464 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 EPHA4P54764 986 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 TPD52P55327 224 aaPredicted RBP8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 MAZP56270 477 aaKnown RBP8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 RAB38P57729 211 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 SMIM11AP58511 58 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 HNRNPKP61978 463 aaKnown RBP eCLIP8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 PPP1CAP62136 330 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 C1orf61Q13536 156 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 TUBA3CQ13748 450 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 MAD2L1BPQ15013 274 aaPredicted RBP8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 DEFB134Q4QY38 66 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF628Q5EBL2 1059 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 COLEC12Q5KU26 742 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 MLIPQ5VWP3 458 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 GTF2IRD2BQ6EKJ0 949 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 XAF1Q6GPH4 301 aa8.5□□□□□ -1.05
LINCMD1-201ENST00000418518 TCTN3Q6NUS6 607 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms