RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CCDC88CQ9P219 2028 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 ASCC3Q8N3C0 2202 aaKnown RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 KLHL33A6NCF5 533 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 APOL3O95236 402 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 CD72P21854 359 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 LEPRP48357 1165 aaKnown RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 RBPJQ06330 500 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 PCLAFQ15004 111 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 PPP1R3AQ16821 1122 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 WDR6Q9NNW5 1121 aaKnown RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 GPRC5BQ9NZH0 403 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 KLHL21Q9UJP4 597 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 PRAMEF2O60811 474 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 MPC1LP0DKB6 136 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 ACTA2P62736 377 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 RPS26P62854 115 aaKnown RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 ACTG2P63267 376 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 ATXN7L3Q14CW9 347 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 RABL3Q5HYI8 236 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 C3P1Q6ZMU1 363 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF572Q7Z3I7 529 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 SMG8Q8ND04 991 aaKnown RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 PAAF1Q9BRP4 392 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 RETREG1Q9H6L5 497 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 TRIM64CA6NLI5 447 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 LRRN3E7EW58 273 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 SPINT3P49223 89 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 POLR2HP52434 150 aaKnown RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 TLE3Q04726 772 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 HNRNPA0Q13151 305 aaKnown RBP10.71□□□□□ -0.7
PTCH1-205ENST00000418258 DCDC5Q6ZRR9 648 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 SHISA6Q6ZSJ9 500 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 RABEPKQ7Z6M1 372 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 UEVLDQ8IX04 471 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 SAMD12Q8N8I0 201 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 GALNT6Q8NCL4 622 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 GATAD2BQ8WXI9 593 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 LRRN3Q9H3W5 708 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 SLCO3A1Q9UIG8 710 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 TMEM14AQ9Y6G1 99 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 RNF215Q9Y6U7 377 aa10.71□□□□□ -0.7
PTCH1-205ENST00000418258 POLR1CO15160 346 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 LPLP06858 475 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 VMACQ2NL98 169 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 UBE2UQ5VVX9 321 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 SLC18B1Q6NT16 456 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 TMPRSS12Q86WS5 348 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 NEIL3Q8TAT5 605 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 IMP4Q96G21 291 aaKnown RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 AP1S3Q96PC3 154 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PAPOLGQ9BWT3 736 aaKnown RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 CWH43Q9H720 699 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 SIX4Q9UIU6 781 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PTRH2Q9Y3E5 179 aaKnown RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 C10orf71Q711Q0 1435 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 NARSO43776 548 aaKnown RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ACTC1P68032 377 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ACTA1P68133 377 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MSS51Q4VC12 460 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 LIPKQ5VXJ0 399 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 OR52E8Q6IFG1 317 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 DPY19L4Q7Z388 723 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 KLHDC8AQ8IYD2 350 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 CDCA3Q99618 268 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PKP2Q99959 881 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ENAMQ9NRM1 1142 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PCDHB10Q9UN67 800 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 K7ERQ8 282 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 GNAO1P09471 354 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 LCN1P31025 176 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 UGT2B10P36537 528 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ACY1Q03154 408 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MEP1AQ16819 746 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PRAMEF8Q5VWM4 474 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PRAMEF7Q5VXH5 474 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MFSD8Q8NHS3 518 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 SGTBQ96EQ0 304 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 HS6ST2Q96MM7 605 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 COPZ2Q9P299 210 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 IL20RAQ9UHF4 553 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ABCG2Q9UNQ0 655 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 LTBP3Q9NS15 1303 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 FAM155AB1AL88 458 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 H3BML4 177 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 LSM1O15116 133 aaKnown RBP10.7□□□□□ -0.7
PTCH1-205ENST00000418258 CELP19835 753 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ACVR1BP36896 505 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 GSTM4Q03013 218 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 TMEM139Q8IV31 216 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MRGPRX2Q96LB1 330 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 DOHHQ9BU89 302 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PLEKHA3Q9HB20 300 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ABRACLQ9P1F3 81 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 HHLA1C9JL84 531 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MEN1O00255 615 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 GCH1P30793 250 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 GRIN2CQ14957 1233 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MEDAGQ5VYS4 303 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 FAM46AQ96IP4 442 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms