RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TRIM3O75382 744 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TGDSO95455 350 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 LATS1O95835 1130 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 GUCA1CO95843 209 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 DHFRP00374 187 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 GOT2P00505 430 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 PLGP00747 810 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CRYABP02511 175 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 IFNA4P05014 189 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 UGT2B4P06133 528 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 HEXBP07686 556 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 DBTP11182 482 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 FDPSP14324 419 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TMEM11P17152 192 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ALOX12P18054 663 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TAC1P20366 129 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CD40LGP29965 261 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 PDIA3P30101 505 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ATP6V1E1P36543 226 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 HPCAL1P37235 193 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CASP3P42574 277 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 NDST2P52849 883 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 NKX2-5P52952 324 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 SPCS3P61009 180 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 RPS16P62249 146 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 YWHAEP62258 255 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 RPS15P62841 145 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CDH18Q13634 790 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 THOC5Q13769 683 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 KEAP1Q14145 624 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 PPA1Q15181 289 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 SPA17Q15506 151 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 MAPKAPK3Q16644 382 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TYSND1Q2T9J0 566 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 LBHQ53QV2 105 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 RUNDC3AQ59EK9 446 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 PXDC1Q5TGL8 231 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 IRAK1BP1Q5VVH5 260 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 GARNL3Q5VVW2 1013 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF544Q6NX49 715 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TTI2Q6NXR4 508 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ZFP1Q6P2D0 407 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CNSTQ6PJW8 725 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ZYG11AQ6WRX3 759 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 STXBP4Q6ZWJ1 553 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ERN2Q76MJ5 926 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TRMT10CQ7L0Y3 403 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 GPRIN1Q7Z2K8 1008 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC9B2Q86UD5 537 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 PLCZ1Q86YW0 608 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ARMC8Q8IUR7 673 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CHERPQ8IWX8 916 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CLEC4FQ8N1N0 589 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 SNX31Q8N9S9 440 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 FAM71DQ8N9W8 422 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TTC29Q8NA56 475 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 MCUQ8NE86 351 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ZMIZ2Q8NF64 920 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 OR5H6Q8NGV6 325 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 OR52N1Q8NH53 320 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 KCTD4Q8WVF5 259 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 UBLCP1Q8WVY7 318 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ROBO4Q8WZ75 1007 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 TSACCQ96A04 125 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 C12orf43Q96C57 262 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC25A36Q96CQ1 311 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 NEIL1Q96FI4 390 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 HPDLQ96IR7 371 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 MRPL45Q9BRJ2 306 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 PELOQ9BRX2 385 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 HERPUD2Q9BSE4 406 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 MRPS30Q9NP92 439 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 AKIP1Q9NQ31 210 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 PNPLA3Q9NST1 481 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 C20orf96Q9NUD7 363 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ACOXLQ9NUZ1 547 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 FBXO34Q9NWN3 711 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 OR6C2Q9NZP2 312 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 JKAMPQ9P055 326 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 LRFN1Q9P244 771 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 KLQ9UEF7 1012 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 SIX4Q9UIU6 781 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF221Q9UK13 617 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 GRIP1Q9Y3R0 1128 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 NME7Q9Y5B8 376 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 AP1M2Q9Y6Q5 423 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 A0A087WV62 115 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TMEM120BA0PK00 339 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 NPIPB6E9PJ23 425 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TFECO14948 347 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CLIC2O15247 247 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PRPF4O43172 522 aaKnown RBP eCLIP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 IRAK2O43187 625 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ARHGEF9O43307 516 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CTAG2O75638 210 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PIGNO95427 931 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 H6PDO95479 791 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TSPAN15O95858 294 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC4A1P02730 911 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 YES1P07947 543 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms