RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 EPB42P16452 691 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 UQCRC1P31930 480 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 SERPINB5P36952 375 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 TRPC1P48995 793 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 MAN2A2P49641 1150 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 NAGLUP54802 743 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 STXBP1P61764 594 aaKnown RBP11.88□□□□□ -0.51
LINC00339-202ENST00000416769 ADAM8P78325 824 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 GTF2H2Q13888 395 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 NIPAL1Q6NVV3 410 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 GTF2H2CQ6P1K8 395 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 ABHD17CQ6PCB6 329 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 PAOXQ6QHF9 649 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 TMIGD1Q6UXZ0 262 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 GK5Q6ZS86 529 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 C9orf40Q8IXQ3 194 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 RNF175Q8N4F7 328 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 TEX9Q8N6V9 391 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 FAM76AQ8TAV0 307 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 ZNF721Q8TF20 911 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 ZNF483Q8TF39 744 aaPredicted RBP11.88□□□□□ -0.51
LINC00339-202ENST00000416769 ANKRD9Q96BM1 317 aaPredicted RBP11.88□□□□□ -0.51
LINC00339-202ENST00000416769 TMEM237Q96Q45 408 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 CLK4Q9HAZ1 481 aaKnown RBP11.88□□□□□ -0.51
LINC00339-202ENST00000416769 PRDM7Q9NQW5 492 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 RASSF1Q9NS23 344 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 PCTPQ9UKL6 214 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 CBLCQ9ULV8 474 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 ANGPTL3Q9Y5C1 460 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 CLCA3PQ9Y6N3 262 aa11.88□□□□□ -0.51
LINC00339-202ENST00000416769 FAM221AA4D161 298 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 OR14I1A6ND48 311 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 WASHC1A8K0Z3 465 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 SAP18O00422 153 aaKnown RBP11.87□□□□□ -0.51
LINC00339-202ENST00000416769 FGF17O60258 216 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 NEFHP12036 1026 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 GNAZP19086 355 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 EPORP19235 508 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 GRK2P25098 689 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 CASP2P42575 452 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 KIR2DL3P43628 341 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 AGFG1P52594 562 aaKnown RBP11.87□□□□□ -0.51
LINC00339-202ENST00000416769 CLCQ05315 142 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 GALNT1Q10472 559 aaPredicted RBP11.87□□□□□ -0.51
LINC00339-202ENST00000416769 PDK4Q16654 411 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 ADPRMQ3LIE5 342 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 CFAP157Q5JU67 520 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 NDUFAF5Q5TEU4 345 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 POMZP3Q6PJE2 187 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 TMEM64Q6YI46 380 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 GOLGA7Q7Z5G4 137 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 KRTAP1-3Q8IUG1 177 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 GPALPP1Q8IXQ4 340 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 CCNYL1Q8N7R7 359 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 SNX31Q8N9S9 440 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 TNIP2Q8NFZ5 429 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 OR2L5Q8NG80 312 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 RAB3IL1Q8TBN0 382 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 PPWD1Q96BP3 646 aaKnown RBP11.87□□□□□ -0.51
LINC00339-202ENST00000416769 TRMOQ9BU70 441 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 NTMT1Q9BV86 223 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 NPLQ9BXD5 320 aaPredicted RBP11.87□□□□□ -0.51
LINC00339-202ENST00000416769 REXO4Q9GZR2 422 aaKnown RBP11.87□□□□□ -0.51
LINC00339-202ENST00000416769 GSTO2Q9H4Y5 243 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 EXO5Q9H790 373 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 ZNF703Q9H7S9 590 aaPredicted RBP11.87□□□□□ -0.51
LINC00339-202ENST00000416769 MANSC1Q9H8J5 431 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 IPPKQ9H8X2 491 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 ZBTB26Q9HCK0 441 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 SH2D2AQ9NP31 389 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 SACM1LQ9NTJ5 587 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 VTI1BQ9UEU0 232 aa11.87□□□□□ -0.51
LINC00339-202ENST00000416769 NSD1Q96L73 2696 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-202ENST00000416769 TLN2Q9Y4G6 2542 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 CTNSO60931 367 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 SNUPNO95149 360 aaKnown RBP11.86□□□□□ -0.51
LINC00339-202ENST00000416769 SERPINE1P05121 402 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 TNNI3P19429 210 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 BMP5P22003 454 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 MTTPP55157 894 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 CDH13P55290 713 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 STX3Q13277 289 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 E2F2Q14209 437 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 SLC10A1Q14973 349 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 CHI3L2Q15782 390 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 TBCCQ15814 346 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 HYAL4Q2M3T9 481 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 ZNF791Q3KP31 576 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-202ENST00000416769 LIPJQ5W064 366 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 ATG16L1Q676U5 607 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 BICRALQ6AI39 1079 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 FRMD7Q6ZUT3 714 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 ZNF595Q8IYB9 648 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 ULK2Q8IYT8 1036 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 TMEM132CQ8N3T6 1108 aa11.86□□□□□ -0.51
LINC00339-202ENST00000416769 MORN4Q8NDC4 146 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms