RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 NME6O75414 186 aaPredicted RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 KRT6AP02538 564 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 KRT6BP04259 564 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 FBXO45P0C2W1 286 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 AGAP20933 346 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 ATP5F1P24539 256 aaPredicted RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 KRT6CP48668 564 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 HTR6P50406 440 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 NUP107P57740 925 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 HMGCS1Q01581 520 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 DUSP2Q05923 314 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 TBL3Q12788 808 aaKnown RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 RASA2Q15283 850 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 LTB4RQ15722 352 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 TMEM211Q6ICI0 200 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 SLC15A4Q8N697 577 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 SIMC1Q8NDZ2 872 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 CDC26Q8NHZ8 85 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 PAQR8Q8TEZ7 354 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 PHF10Q8WUB8 498 aaKnown RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 RND1Q92730 232 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 KLHL29Q96CT2 875 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 DOHHQ9BU89 302 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 OR10A5Q9H207 317 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 SLC6A15Q9H2J7 730 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 EPB41L4BQ9H329 900 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 PROK2Q9HC23 129 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 ZFP64Q9NPA5 681 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 NMRK1Q9NWW6 199 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 PSMC3IPQ9P2W1 217 aaPredicted RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 VPS29Q9UBQ0 182 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 TRPS1Q9UHF7 1281 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 ADAM29Q9UKF5 820 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 CES1P1Q9UKY3 287 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 BOKQ9UMX3 212 aaPredicted RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 RNF6Q9Y252 685 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 CHCHD2Q9Y6H1 151 aaPredicted RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 INTS1Q8N201 2190 aaKnown RBP10.67□□□□□ -0.7
LINC00963-201ENST00000412141 SPG11Q96JI7 2443 aa10.67□□□□□ -0.7
LINC00963-201ENST00000412141 AKAP9Q99996 3911 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 TRGV5A0A0B4J1U4 118 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 GNG14A0A1W2PPG7 69 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 C2orf72A6NCS6 295 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 LRRC3CA6NJW4 275 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 OR6C76A6NM76 312 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 TP53I11O14683 189 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 ULK1O75385 1050 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 TRAPPC6AO75865 159 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 SHBGP04278 402 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 KRT15P19012 456 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 IMPDH1P20839 514 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 TOMM20Q15388 145 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 TRMT12Q53H54 448 aaKnown RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 SPDYAQ5MJ70 313 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 C10orf62Q5T681 223 aaPredicted RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 DESI1Q6ICB0 168 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 SLC48A1Q6P1K1 146 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 MEX3BQ6ZN04 569 aaKnown RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 GDF7Q7Z4P5 450 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 VWA5B2Q8N398 1253 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 FBXW8Q8N3Y1 598 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 ZNF615Q8N8J6 731 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 MYRIPQ8NFW9 859 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 UBLCP1Q8WVY7 318 aaPredicted RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 EXOSC8Q96B26 276 aaKnown RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 ZNF382Q96SR6 550 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 C1QTNF3Q9BXJ4 246 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 EBPLQ9BY08 206 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 TXLNGYQ9BZA5 131 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 ACPTQ9BZG2 426 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 SHCBP1LQ9BZQ2 653 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 NXF5Q9H1B4 397 aaKnown RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 C12orf65Q9H3J6 166 aaKnown RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 ANKRA2Q9H9E1 313 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 BRF2Q9HAW0 419 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 SH2D2AQ9NP31 389 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 EHD3Q9NZN3 535 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 CNIH4Q9P003 139 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 SPRR3Q9UBC9 169 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 HEY2Q9UBP5 337 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 CNOT11Q9UKZ1 510 aaKnown RBP10.66□□□□□ -0.7
LINC00963-201ENST00000412141 PSME2Q9UL46 239 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 DTX4Q9Y2E6 619 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 DLGAP4Q9Y2H0 992 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 NPFFR2Q9Y5X5 522 aa10.66□□□□□ -0.7
LINC00963-201ENST00000412141 C1orf226A1L170 272 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 GOLGA6L10A6NI86 522 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 BCKDKO14874 412 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 IGHG3P01860 377 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 IL3P08700 152 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 PCSK2P16519 638 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 CSNK2A2P19784 350 aaPredicted RBP10.65□□□□□ -0.7
LINC00963-201ENST00000412141 S1PR1P21453 382 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 ACVR2AP27037 513 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 GDF1P27539 372 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 CHRNB4P30926 498 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 GALNSP34059 522 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 MASP1P48740 699 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 PRKAA2P54646 552 aa10.65□□□□□ -0.7
LINC00963-201ENST00000412141 NRG3P56975 720 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms