RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ATOH8Q96SQ7 321 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SECISBP2Q96T21 854 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CALHM2Q9HA72 323 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 WDR41Q9HAD4 459 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CXorf21Q9HAI6 301 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NMRAL1Q9HBL8 299 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 JKAMPQ9P055 326 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ANGPTL3Q9Y5C1 460 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PCDHGA11Q9Y5H2 935 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 VPS13CQ709C8 3753 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 A0A0A6YYD5 115 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 A0A1W2PS29 197 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ZSCAN12O43309 604 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GOSR1O95249 250 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 AIFM1O95831 613 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 IL18BPO95998 194 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SPRP35270 261 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GP5P40197 560 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NAGLUP54802 743 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NRG3P56975 720 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RPP38P78345 283 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NKX6-1P78426 367 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CBLBQ13191 982 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RCAN2Q14206 197 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SETDB1Q15047 1291 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CLEC9AQ6UXN8 241 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PRR22Q8IZ63 422 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 C9orf106Q8NAJ2 232 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 UBTD2Q8WUN7 234 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RBM24Q9BX46 236 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 OR10A5Q9H207 317 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DDX31Q9H8H2 851 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ACTR8Q9H981 624 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SAYSD1Q9NPB0 183 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TSC22D4Q9Y3Q8 395 aa13.01□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TCRBV9S1A1TA0A576 114 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FAM159BA6NKW6 160 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PGRMC2O15173 223 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 KERAO60938 352 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ERN1O75460 977 aaKnown RBP13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GBAP04062 536 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 HRGP04196 525 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CT62P0C5K7 136 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TMIGD3P0DMS9 266 aaPredicted RBP13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CD53P19397 219 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PIK3R1P27986 724 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SLCO1A2P46721 670 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PHEXP78562 749 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FUT7Q11130 342 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FOXF2Q12947 444 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GRTP1Q5TC63 336 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 LIPJQ5W064 366 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TIGD3Q6B0B8 471 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 C3orf62Q6ZUJ4 267 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CMC1Q7Z7K0 106 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 LUZP2Q86TE4 346 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TBC1D1Q86TI0 1168 aaPredicted RBP13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 YRDCQ86U90 279 aaKnown RBP13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CREG2Q8IUH2 290 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CTAGE3PQ8IX95 158 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GALNT12Q8IXK2 581 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ZNF615Q8N8J6 731 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FAM83FQ8NEG4 500 aaPredicted RBP13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 OR1J4Q8NGS1 313 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ZPLD1Q8TCW7 415 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ADIPOR1Q96A54 375 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TMEM41AQ96HV5 264 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 BEX4Q9NWD9 120 aaPredicted RBP13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MED12Q93074 2177 aa13□□□□□ -0.33
HLA-DQB2-229ENST00000411527 A0A1W2PPR1 153 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 H0YIV9 168 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CCDC188H7C350 402 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ACTL6AO96019 429 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 LTA4HP09960 611 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CYP4B1P13584 511 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 KRT15P19012 456 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PTPN6P29350 595 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SOX18P35713 384 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CPA2P48052 419 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NEK2P51955 445 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CUL3Q13618 768 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CPSF6Q16630 551 aaKnown RBP eCLIP12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SHEQ5VZ18 495 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 OR52E8Q6IFG1 317 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ANGPTL8Q6UXH0 198 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CYS1Q717R9 158 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TAOK1Q7L7X3 1001 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NUDT13Q86X67 352 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 KRTAP1-3Q8IUG1 177 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NXNL1Q96CM4 212 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NTNG2Q96CW9 530 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 REPS1Q96D71 796 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DACH2Q96NX9 599 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 METTL7AQ9H8H3 244 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ZNF395Q9H8N7 513 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms