RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 METTL2BQ6P1Q9 378 aaKnown RBP16.53■□□□□ 0.24
NRXN1-209ENST00000405581 KLHDC8AQ8IYD2 350 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 OR52N2Q8NGI0 321 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 CNN2Q99439 309 aaKnown RBP16.53■□□□□ 0.24
NRXN1-209ENST00000405581 CCDC86Q9H6F5 360 aaKnown RBP16.53■□□□□ 0.24
NRXN1-209ENST00000405581 PRAMEF2O60811 474 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 THEGLP0DJG4 465 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 DRD1P21728 446 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 MAGEA8P43361 318 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 ECH1Q13011 328 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 WDTC1Q8N5D0 677 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 OR8K3Q8NH51 312 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 TRIM43Q96BQ3 446 aaPredicted RBP16.53■□□□□ 0.24
NRXN1-209ENST00000405581 MUS81Q96NY9 551 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 SLC12A9Q9BXP2 914 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 IGKV6D-21A0A0A0MT36 114 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 M0QZQ0 153 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 TSPAN4O14817 238 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 TGM5O43548 720 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 ATG12O94817 140 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 GTF2F2P13984 249 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 IRF2P14316 349 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 BPIP17213 487 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 PYCR1P32322 319 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 EIF2S3LQ2VIR3 472 aaKnown RBP16.53■□□□□ 0.24
NRXN1-209ENST00000405581 TMEM69Q5SWH9 247 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 CEACAM19Q7Z692 300 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 ZNF611Q8N823 705 aa16.53■□□□□ 0.24
NRXN1-209ENST00000405581 UGDHO60701 494 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 IFNA2P01563 188 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 UBE2NP61088 152 aaKnown RBP16.52■□□□□ 0.24
NRXN1-209ENST00000405581 ZNF648Q5T619 568 aaPredicted RBP16.52■□□□□ 0.24
NRXN1-209ENST00000405581 RTL10Q7L3V2 364 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 ENDOVQ8N8Q3 282 aaKnown RBP16.52■□□□□ 0.24
NRXN1-209ENST00000405581 HAVCR2Q8TDQ0 301 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 ZNF350Q9GZX5 532 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 ATE1O95260 518 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 GSCP56915 257 aaPredicted RBP16.52■□□□□ 0.24
NRXN1-209ENST00000405581 CTC1Q2NKJ3 1217 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 SFT2D3Q587I9 215 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 LRFN4Q6PJG9 635 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 LIX1LQ8IVB5 337 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 ZFYVE21Q9BQ24 234 aa16.52■□□□□ 0.24
NRXN1-209ENST00000405581 MARCH4Q9P2E8 410 aaPredicted RBP16.52■□□□□ 0.24
NRXN1-209ENST00000405581 M0R036 132 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 PROS1P07225 676 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 ARL3P36405 182 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 IST1P53990 364 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 TDGQ13569 410 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 UGT2A3Q6UWM9 527 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.23
NRXN1-209ENST00000405581 POGLUT1Q8NBL1 392 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 ZDHHC1Q8WTX9 485 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 DIO2Q92813 273 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 SRA1Q9HD15 236 aaKnown RBP16.52■□□□□ 0.23
NRXN1-209ENST00000405581 ZNF701Q9NV72 531 aaPredicted RBP16.52■□□□□ 0.23
NRXN1-209ENST00000405581 NKX1-2Q9UD57 310 aaPredicted RBP16.52■□□□□ 0.23
NRXN1-209ENST00000405581 NFS1Q9Y697 457 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 JRKO75564 520 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 NIPAL4Q0D2K0 466 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 NSDHLQ15738 373 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 PM20D1Q6GTS8 502 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 ATG5Q9H1Y0 275 aa16.52■□□□□ 0.23
NRXN1-209ENST00000405581 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ZNF182P17025 639 aaPredicted RBP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 NPRL3Q12980 569 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 GK3PQ14409 553 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ECHDC3Q96DC8 303 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 L3HYPDHQ96EM0 354 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 KCNN3Q9UGI6 736 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 SMCO3A2RU48 225 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 SOCS2O14508 198 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 PABPC4LP0CB38 370 aaKnown RBP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 NAA10P41227 235 aaPredicted RBP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 PIGGQ5H8A4 983 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 TMPRSS12Q86WS5 348 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 METTL25Q8N6Q8 603 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 OR8K5Q8NH50 307 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 MFSD8Q8NHS3 518 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 FAM46BQ96A09 425 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 DDIT4LQ96D03 193 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 STRA6Q9BX79 667 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 KCNK13Q9HB14 408 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 HIF3AQ9Y2N7 669 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 FMO6PO60774 539 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 SPHARQ15513 63 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 GTF2IRD2BQ6EKJ0 949 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 USP53Q70EK8 1073 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 GTF2IRD2Q86UP8 949 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 APCDD1Q8J025 514 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 IL17RCQ8NAC3 791 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ACVR1CQ8NER5 493 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 TSACCQ96A04 125 aaPredicted RBP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ACTRT3Q9BYD9 372 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 GDE1Q9NZC3 331 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ANKMY1Q9P2S6 941 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 TRBV2A0A0J9YWF9 115 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ISPDA4D126 451 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 TRAPPC13A5PLN9 417 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms