RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RBP7Q96R05 134 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 PAK1IP1Q9NWT1 392 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 GNG8Q9UK08 70 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 CACNG3O60359 315 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 HEXBP07686 556 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 PEPDP12955 493 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 STARP49675 285 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 MC1RQ01726 317 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 NNATQ16517 81 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 GFOD2Q3B7J2 385 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 FAM180BQ6P0A1 224 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 MAVSQ7Z434 540 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR5M3Q8NGP4 307 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 TFAP2CQ92754 450 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 SERINC2Q96SA4 455 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 GAL3ST1Q99999 423 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 CDH10Q9Y6N8 788 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 PRAMEF26H0Y7S4 382 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 TNFRSF1BP20333 461 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 P2RY2P41231 377 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF45Q02386 682 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 GK3PQ14409 553 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 PLEKHG7Q6ZR37 379 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 PRSS48Q7RTY5 328 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 SPPL3Q8TCT6 385 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 TPSD1Q9BZJ3 242 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 BRD7Q9NPI1 651 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 NUMA1Q14980 2115 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 H0YIV9 168 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 HTR1AP08908 422 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 OSMP13725 252 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF20P17024 532 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 MAPK3P27361 379 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 HOXA9P31269 272 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 TSPAN5P62079 268 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 ACTC1P68032 377 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 ACTA1P68133 377 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 ADAM15Q13444 863 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 SMCO1Q147U7 214 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 IRF4Q15306 451 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 LRRC26Q2I0M4 334 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 PROX2Q3B8N5 592 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 Q6ZSR9 355 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 GPR149Q86SP6 731 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 DCP2Q8IU60 420 aaKnown RBP13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF440Q8IYI8 595 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 GATSQ8NAP1 163 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR52E1Q8NGJ3 308 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 GAL3ST3Q96A11 431 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 COQ8BQ96D53 544 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 SEC61A2Q9H9S3 476 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 MOV10Q9HCE1 1003 aaKnown RBP13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 F5P12259 2224 aa13.52□□□□□ -0.25
PCDHGA11-201ENST00000398587 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 SOX1O00570 391 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PRODHO43272 600 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PGFP49763 221 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 DUSP3P51452 185 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 TRA2BP62995 288 aaKnown RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 ACVR1Q04771 509 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MAPK14Q16539 360 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MICAQ29983 383 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 RFLNAQ6ZTI6 216 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLITRK4Q8IW52 837 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 ACOT4Q8N9L9 421 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZDHHC1Q8WTX9 485 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 NKD1Q969G9 470 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PREBQ9HCU5 417 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 NFKBIL1Q9UBC1 381 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 DLGAP1O14490 977 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PROS1P07225 676 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 GJA8P48165 433 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 SGCBQ16585 318 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 WSCD2Q2TBF2 565 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PUS10Q3MIT2 529 aaKnown RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 LIPKQ5VXJ0 399 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 TRIM73Q86UV7 250 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PLXDC1Q8IUK5 500 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MAELQ96JY0 434 aaKnown RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MS4A4EQ96PG1 132 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 FUNDC2Q9BWH2 189 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLC22A31A6NKX4 558 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR7A17O14581 309 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 JRKO75564 520 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 APOL3O95236 402 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 FBLP22087 321 aaKnown RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 CERS1P27544 350 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 CNR2P34972 360 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF41P51814 821 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 HK3P52790 923 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 OLFML2AQ68BL7 652 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 ASB18Q6ZVZ8 466 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 BTN2A1Q7KYR7 527 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLC22A16Q86VW1 577 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 GPALPP1Q8IXQ4 340 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 CDRT4Q8N9R6 151 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 L3MBTL4Q8NA19 623 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 WFDC5Q8TCV5 224 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 SGTBQ96EQ0 304 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 HSPA12BQ96MM6 686 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms