RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 NFATC1O95644 943 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 FGF19O95750 216 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 OSMP13725 252 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MAPK3P27361 379 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PCGF2P35227 344 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CASP3P42574 277 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 HBA1P69905 142 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SIM1P81133 766 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 KCNJ8Q15842 424 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ATAT1Q5SQI0 421 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 OR2G6Q5TZ20 316 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 OR4C11Q6IEV9 310 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 KIAA1324Q6UXG2 1013 aaKnown RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 FAM83HQ6ZRV2 1179 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NEK10Q6ZWH5 1172 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C12orf40Q86WS4 652 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 FAM46DQ8NEK8 389 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 OR14C36Q8NHC7 312 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 LRRC20Q8TCA0 184 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 APH1BQ8WW43 257 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 COQ8BQ96D53 544 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C11orf49Q9H6J7 331 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PELI2Q9HAT8 420 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 RPS6KB2Q9UBS0 482 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 GPR52Q9Y2T5 361 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SCN5AQ14524 2016 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 COL11A2P13942 1736 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 DLEC1Q9Y238 1755 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SNTNA6NMZ2 147 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 K7ESM1 405 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 DYRK3O43781 588 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF821O75541 412 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PAK4O96013 591 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NR2F6P10588 404 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TNFSF8P32971 234 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 GRK5P34947 590 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 RORCP51449 518 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 IFITM3Q01628 133 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SLC5A12Q1EHB4 618 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF791Q3KP31 576 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CRB2Q5IJ48 1285 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SYT6Q5T7P8 510 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MZT2AQ6P582 158 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 VN1R5Q7Z5H4 357 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 BBS10Q8TAM1 723 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CXorf40BQ96DE9 158 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 DOK1Q99704 481 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 DPH7Q9BTV6 452 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CENPOQ9BU64 300 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 DUSP21Q9H596 190 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NECTIN3Q9NQS3 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MBNL1Q9NR56 388 aaKnown RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TEX10Q9NXF1 929 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ANKMY1Q9P2S6 941 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MKLN1Q9UL63 735 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NDRG4Q9ULP0 352 aaKnown RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CA5BQ9Y2D0 317 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MRPS7Q9Y2R9 242 aaKnown RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 DNMT3AQ9Y6K1 912 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SPTBN5Q9NRC6 3674 aaKnown RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 IQCMA0A1B0GVH7 501 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 GFRA2O00451 464 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SSX4O60224 188 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SCN2BO60939 215 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 UPK1BO75841 260 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ADH1CP00326 375 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 RPN2P04844 631 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF16P17020 682 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PRLHRP49683 370 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 KRR1Q13601 381 aaKnown RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NCF4Q15080 339 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C3orf38Q5JPI3 329 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CDKL4Q5MAI5 379 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C6orf132Q5T0Z8 1188 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TRIQKQ629K1 86 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM215Q68D42 235 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF730Q6ZMV8 503 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ASB18Q6ZVZ8 466 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PRICKLE2Q7Z3G6 844 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 LHFPL3Q86UP9 236 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 COMMD2Q86X83 199 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 VRK2Q86Y07 508 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TRIM48Q8IWZ4 208 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MFSD4AQ8N468 514 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 OR4K5Q8NGD3 323 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CHPT1Q8WUD6 406 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C16orf58Q96GQ5 468 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NKIRAS2Q9NYR9 191 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NDUFAF4Q9P032 175 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ENOPH1Q9UHY7 261 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3DA0A087WVF3 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3IA0A087WXS9 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3EA0A087X179 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3KA0A087X1G2 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3FA6NER0 549 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 IGLON5A6NGN9 336 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3LB9A6J9 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PLD2O14939 933 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MPZL2O60487 215 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 GPX5O75715 221 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms