RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ZER1Q7Z7L7 766 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ACVR1CQ8NER5 493 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 OR10A4Q9H209 315 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 REV1Q9UBZ9 1251 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 FXYD6-FXYD2A0A087WZ82 144 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 GJE1A6NN92 205 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 CKMT1AP12532 417 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 HMGCLP35914 325 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 MAGEA2P43356 314 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 PIP5K1AQ99755 562 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 FXYD6Q9H0Q3 95 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 FPR1P21462 350 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 GINS1Q14691 196 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SWT1Q5T5J6 900 aaKnown RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 SLC39A11Q8N1S5 342 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ACTR3BQ9P1U1 418 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 BCAT2O15382 392 aaPredicted RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 ARL6IP5O75915 188 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 PVRP15151 417 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 LHCGRP22888 699 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ACADVLP49748 655 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 OR5M10Q6IEU7 315 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 OR9K2Q8NGE7 335 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ACOT12Q8WYK0 555 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 AIFM2Q9BRQ8 373 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 H6PDO95479 791 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ZNF43P17038 809 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ACVR1BP36896 505 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CDK3Q00526 305 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CES4AQ5XG92 561 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 MRPL10Q7Z7H8 261 aaKnown RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 GALNT15Q8N3T1 639 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 SCRN2Q96FV2 425 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 PELOQ9BRX2 385 aaKnown RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 MYEF2Q9P2K5 600 aaKnown RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 MAS1P04201 325 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 GJA8P48165 433 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CSNK1EP49674 416 aaKnown RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 HSD11B2P80365 405 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 POGLUT1Q8NBL1 392 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 OR52E2Q8NGJ4 325 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 DRD2P14416 443 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 TAS2R38P59533 333 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 SLC18A2Q05940 514 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 NEDD4LQ96PU5 975 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 DNTTIP1Q9H147 329 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 RXFP3Q9NSD7 469 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CLDN25C9JDP6 229 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 SMAD2Q15796 467 aaKnown RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 UNQ6126/PRO20091Q6UXV3 157 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ZNF334Q9HCZ1 680 aaPredicted RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 PCDHB16Q9NRJ7 776 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 TMEM184CQ9NVA4 438 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 NAALAD2Q9Y3Q0 740 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 DNAJC25-GNG10A0A024R161 153 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CLIC3O95833 236 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ITGB7P26010 798 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 RHDQ02161 417 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 WSCD2Q2TBF2 565 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ANKDD1AQ495B1 522 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 KIAA1614Q5VZ46 1190 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 HSD11B1LQ7Z5J1 315 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 UEVLDQ8IX04 471 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 SERINC2Q96SA4 455 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CDH20Q9HBT6 801 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 SLAMF7Q9NQ25 335 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 A0A0J9YY10 115 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 FTCDNL1E5RQL4 147 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ABCB7O75027 752 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 GCGRP47871 477 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 DNAJB13P59910 316 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 LACTB2Q53H82 288 aaPredicted RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 SLC5A8Q8N695 610 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 MGAT4BQ9UQ53 548 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ETFAP13804 333 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 SYT14Q8NB59 555 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 NPRL2Q8WTW4 380 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 TRIM43Q96BQ3 446 aaPredicted RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 TM9SF3Q9HD45 589 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 SH2B3Q9UQQ2 575 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CITO14578 2027 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 TNFRSF1BP20333 461 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ELK4P28324 431 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 EIF2S3P41091 472 aaKnown RBP10.81□□□□□ -0.68
TTC28-201ENST00000397906 DPP6P42658 865 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 TAS2R43P59537 309 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ADAM15Q13444 863 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 C6orf132Q5T0Z8 1188 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 GALNT6Q8NCL4 622 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 OR52E1Q8NGJ3 308 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 GATAD2BQ8WXI9 593 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 CLSTN3Q9BQT9 956 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 ZNF559Q9BR84 538 aa10.81□□□□□ -0.68
TTC28-201ENST00000397906 A0A096LPI6 279 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 MC3RP41968 323 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 XCR1P46094 333 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 LIPKQ5VXJ0 399 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 SLC27A4Q6P1M0 643 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 LEG1Q6P5S2 330 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 C5P01031 1676 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms