RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 STK16O75716 305 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 GPR75O95800 540 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 TGFB1P01137 390 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 PAX1P15863 534 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 SERPINB1P30740 379 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 BUD31P41223 144 aaPredicted RBP13.6□□□□□ -0.23
SEC13-206ENST00000397102 CASP2P42575 452 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 NRG3P56975 720 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 TAS2R39P59534 338 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 IRF8Q02556 426 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 KRTAP1-1Q07627 177 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 CHIT1Q13231 466 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 E2F2Q14209 437 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 SETDB1Q15047 1291 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 FBXO48Q5FWF7 155 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 CDKL4Q5MAI5 379 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 KHDRBS2Q5VWX1 349 aaKnown RBP13.6□□□□□ -0.23
SEC13-206ENST00000397102 HMBOX1Q6NT76 420 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 TRMT10BQ6PF06 316 aaKnown RBP13.6□□□□□ -0.23
SEC13-206ENST00000397102 ANGPTL8Q6UXH0 198 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
SEC13-206ENST00000397102 UBE2E3Q969T4 207 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 ESAMQ96AP7 390 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 CMTM7Q96FZ5 175 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 MED18Q9BUE0 208 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 G6PC3Q9BUM1 346 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 SORBS1Q9BX66 1292 aaKnown RBP13.6□□□□□ -0.23
SEC13-206ENST00000397102 PRM3Q9NNZ6 103 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 SONP18583 2426 aaKnown RBP13.59□□□□□ -0.23
SEC13-206ENST00000397102 A0A1W2PNV4 684 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 C8BP07358 591 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 PCNAP12004 261 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 EPORP19235 508 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 SSTR4P31391 388 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 CD79BP40259 229 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 HNRNPH2P55795 449 aaKnown RBP13.59□□□□□ -0.23
SEC13-206ENST00000397102 SRYQ05066 204 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 DEPDC1Q5TB30 811 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 SULT1C3Q6IMI6 304 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 TMEM81Q6P7N7 255 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 PODNL1Q6PEZ8 512 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 PLXDC2Q6UX71 529 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 LAS2Q8IYD9 372 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 ZCCHC7Q8N3Z6 543 aaKnown RBP13.59□□□□□ -0.23
SEC13-206ENST00000397102 MEIOBQ8N635 442 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 TRIM58Q8NG06 486 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 GRK7Q8WTQ7 553 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 IGFBPL1Q8WX77 278 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 MARK4Q96L34 752 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 HS3ST6Q96QI5 342 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 OR2B2Q9GZK3 357 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 DERL2Q9GZP9 239 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 RBSNQ9H1K0 784 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 METTL7AQ9H8H3 244 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 POPDC3Q9HBV1 291 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 PSAT1Q9Y617 370 aa13.59□□□□□ -0.23
SEC13-206ENST00000397102 ANK3Q12955 4377 aaKnown RBP13.59□□□□□ -0.23
SEC13-206ENST00000397102 DNALI1O14645 258 aaPredicted RBP13.58□□□□□ -0.24
SEC13-206ENST00000397102 CRHP06850 196 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 RHOXF2BP0C7M4 288 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 SLC35E2BP0CK96 405 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 SLC35E2P0CK97 266 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 KRT15P19012 456 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 LOXP28300 417 aaPredicted RBP13.58□□□□□ -0.24
SEC13-206ENST00000397102 RAP1GDS1P52306 607 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 RPS13P62277 151 aaKnown RBP13.58□□□□□ -0.24
SEC13-206ENST00000397102 DMTNQ08495 405 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 STEAP4Q687X5 459 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 HEPHL1Q6MZM0 1159 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 SLC30A6Q6NXT4 461 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 MED27Q6P2C8 311 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 PLEKHM3Q6ZWE6 761 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 GRAMD2AQ8IUY3 354 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 TRIM42Q8IWZ5 723 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 PRR22Q8IZ63 422 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 C17orf47Q8NEP4 570 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 OR14L1PQ8NHC6 308 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 ADIPOR1Q96A54 375 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 RGMAQ96B86 450 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 CFAP36Q96G28 342 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 FAM111AQ96PZ2 611 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 CENPKQ9BS16 269 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 OR51B5Q9H339 312 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 CXorf21Q9HAI6 301 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 LZTFL1Q9NQ48 299 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 CHMP2BQ9UQN3 213 aa13.58□□□□□ -0.24
SEC13-206ENST00000397102 PLOD2O00469 737 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 PLPP1O14494 284 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 HCRTR2O43614 444 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 CCNT2O60583 730 aaKnown RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 TMCC2O75069 709 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 SMNDC1O75940 238 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEC13-206ENST00000397102 IFNA2P01563 188 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ABCB1P08183 1280 aaPredicted RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 NR2F6P10588 404 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 NID1P14543 1247 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 NAGAP17050 411 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ABCD3P28288 659 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 CCKARP32238 428 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms