RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 KCNE1BA0A087WTH5 132 aa14.36□□□□□ -0.11
MCF2L-205ENST00000397017 PCDH17O14917 1159 aa14.36□□□□□ -0.11
MCF2L-205ENST00000397017 BCAT2O15382 392 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-205ENST00000397017 RETP07949 1114 aa14.36□□□□□ -0.11
MCF2L-205ENST00000397017 CD47Q08722 323 aa14.36□□□□□ -0.11
MCF2L-205ENST00000397017 TMEM27Q9HBJ8 222 aa14.36□□□□□ -0.11
MCF2L-205ENST00000397017 SLC6A20Q9NP91 592 aa14.36□□□□□ -0.11
MCF2L-205ENST00000397017 A0A1W2PS29 197 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 AQP9O43315 295 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 PCDHGA12O60330 932 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 ANXA8P13928 327 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 SERPINB1P30740 379 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 YPEL5P62699 121 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 MAP4K2Q12851 820 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 NKG7Q16617 165 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 PRAMEF17Q5VTA0 474 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 GALNT12Q8IXK2 581 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 SVOPQ8N4V2 548 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 PACRGLQ8N7B6 248 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 OR52L1Q8NGH7 329 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 EZH1Q92800 747 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 COX14Q96I36 57 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 LINC00615Q96LM1 132 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 TREX2Q9BQ50 279 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 HCN2Q9UL51 889 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 A0A0J9YY10 115 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 GFERP55789 205 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CSTF1Q05048 431 aaKnown RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 RASGRP3Q8IV61 690 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CDS1Q92903 461 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 MS4A6EQ96DS6 147 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 BARD1Q99728 777 aaKnown RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CHCHD6Q9BRQ6 235 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 GORASP2Q9H8Y8 452 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CD320Q9NPF0 282 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 PCDHGA8Q9Y5G5 932 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 PCDHGA4Q9Y5G9 962 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 ANKRD36A6QL64 1941 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 SMIM30A4D0T7 59 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CHURC1-FNTBB4DL54 471 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 SOX30O94993 753 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 FNTBP49356 437 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CHRNEQ04844 493 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 C1DQ13901 141 aaKnown RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 VRK2Q86Y07 508 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 OR52P1PQ8NH57 321 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 OR51A7Q8NH64 312 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 S1PR5Q9H228 398 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 IL1RAPQ9NPH3 570 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 KRCC1Q9NPI7 259 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 TBC1D23Q9NUY8 699 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 NFKBIL1Q9UBC1 381 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CCL27Q9Y4X3 112 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 KIR2DS5A0A0G2JLQ3 304 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 A0A0G2JNG1 304 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 KIR2DS3K7RE56 304 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 KCNJ13O60928 360 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 XCR1P46094 333 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 OR1D5P58170 312 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 RAE1P78406 368 aaKnown RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 KCNC4Q03721 635 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 BNIP3Q12983 259 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 KIR2DS5Q14953 304 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 FLYWCH1Q4VC44 716 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 OR52E8Q6IFG1 317 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 TMEM64Q6YI46 380 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 PRSS41Q7RTY9 318 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 DCP2Q8IU60 420 aaKnown RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 SAMD14Q8IZD0 417 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 TMEM203Q969S6 136 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 ZDHHC12Q96GR4 267 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CDX2Q99626 313 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 SERHLQ9NQF3 203 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 LYARQ9NX58 379 aaKnown RBP14.35□□□□□ -0.11
MCF2L-205ENST00000397017 CDC14AQ9UNH5 594 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 HCN4Q9Y3Q4 1203 aa14.35□□□□□ -0.11
MCF2L-205ENST00000397017 SEMA3DO95025 777 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 UGT2A3Q6UWM9 527 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 UBE2Q1Q7Z7E8 422 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 EPHX4Q8IUS5 362 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 CYP4Z2PQ8N1L4 340 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 ARL14Q8N4G2 192 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 SLC16A11Q8NCK7 471 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 RCBTB1Q8NDN9 531 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 PHOSPHO1Q8TCT1 267 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 RASSF5Q8WWW0 418 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 METTL21AQ8WXB1 218 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 ZNF597Q96LX8 424 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 ALOXE3Q9BYJ1 711 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 TTYH1Q9H313 450 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-205ENST00000397017 ZNF229Q9UJW7 825 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 ERGIC3Q9Y282 383 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 SVILO95425 2214 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 CHST10O43529 356 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 GPR4P46093 362 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 SLC9A3P48764 834 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 MXD1Q05195 221 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 NPRL3Q12980 569 aa14.34□□□□□ -0.11
MCF2L-205ENST00000397017 ATP1A4Q13733 1029 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms